RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KCNH7Q9NS40 1196 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ERAP1Q9NZ08 941 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PLAGL2Q9UPG8 496 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PCDHGC5Q9Y5F6 944 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 WDFY4Q6ZS81 3184 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KMT2EQ8IZD2 1858 aa12.16□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SMC2O95347 1197 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 ITGB1P05556 798 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 IBSPP21815 317 aaPredicted RBP12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CCT6AP40227 531 aaKnown RBP12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 AFMP43652 599 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 GATMP50440 423 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TYRO3Q06418 890 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 SPIRE1Q08AE8 756 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PNOCQ13519 176 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NCAPH2Q6IBW4 605 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CMTR2Q8IYT2 770 aaKnown RBP12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 CDHR1Q96JP9 859 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PNMA5Q96PV4 448 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TEKT3Q9BXF9 490 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TBC1D22BQ9NU19 505 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 VAV3Q9UKW4 847 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 TRIOO75962 3097 aa12.15□□□□□ -0.46
HLA-DQA1-202ENST00000374949 KDM3AQ9Y4C1 1321 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 FSD2A1L4K1 749 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PLCG1P19174 1290 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NRIP1P48552 1158 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NLRP12P59046 1061 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 AMPD3Q01432 767 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PPP2R5CQ13362 524 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ADAM15Q13444 863 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NAALADL2Q58DX5 795 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 HYIQ5T013 277 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SV2BQ7L1I2 683 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RTN4RL1Q86UN2 441 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NPAS4Q8IUM7 802 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KCTD17Q8N5Z5 321 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KLHL23Q8NBE8 558 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TRAPPC12Q8WVT3 735 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SEPT1Q8WYJ6 367 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ERCC4Q92889 916 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SMARCE1Q969G3 411 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MSLNLQ96KJ4 702 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PCYT2Q99447 389 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 LRRC27Q9C0I9 530 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 KCNH6Q9H252 994 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ANO10Q9NW15 660 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CLEC1BQ9P126 229 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 BARX2Q9UMQ3 279 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PCDHA5Q9Y5H7 936 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TRPV2Q9Y5S1 764 aa12.14□□□□□ -0.47
HLA-DQA1-202ENST00000374949 FNDC1Q4ZHG4 1894 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DHX15O43143 795 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CAVIN2O95810 425 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 GLP2RO95838 553 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MYL1P05976 194 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 INSRRP14616 1297 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RPA1P27694 616 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SARSP49591 514 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PAK2Q13177 524 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EPHA7Q15375 998 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 STX1AQ16623 288 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TMEM119Q4V9L6 283 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 L1TD1Q5T7N2 865 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 NT5DC1Q5TFE4 455 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RBM23Q86U06 439 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 CRIPAKQ8N1N5 446 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EFHBQ8N7U6 833 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SMRP1Q8NCR6 262 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PRSS33Q8NF86 280 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SPPL3Q8TCT6 385 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 POF1BQ8WVV4 589 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 P2RX5Q93086 422 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PPP2R3CQ969Q6 453 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EIF2AK1Q9BQI3 630 aaKnown RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RBSNQ9H1K0 784 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SMARCAD1Q9H4L7 1026 aa12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 JPH1Q9HDC5 661 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQA1-202ENST00000374949 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 M0QZ92 97 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 M0R296 226 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EML1O00423 815 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MED24O75448 989 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 MUTP22033 750 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 RBM10P98175 930 aaKnown RBP12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DPYDQ12882 1025 aa12.12□□□□□ -0.47
HLA-DQA1-202ENST00000374949 ITGB3BPQ13352 177 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms