RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 BAIAP3O94812 1187 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 MYL1P05976 194 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 GAP43P17677 238 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 SCP2P22307 547 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 SFPQP23246 707 aaKnown RBP eCLIP12.55□□□□□ -0.4
HSPG2-202ENST00000374676 EFNA5P52803 228 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 SMTNP53814 917 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 PEX3P56589 373 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-202ENST00000374676 PAK2Q13177 524 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 DMP1Q13316 513 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-202ENST00000374676 ZBTB8OSQ8IWT0 167 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 ELOA2Q8IYF1 753 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-202ENST00000374676 CNNM3Q8NE01 707 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 DEPTORQ8TB45 409 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 HERVK_113Q902F9 699 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 CCDC34Q96HJ3 373 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.55□□□□□ -0.42e-8■■■■■ 31.8
HSPG2-202ENST00000374676 UBE2OQ9C0C9 1292 aaKnown RBP12.55□□□□□ -0.4
HSPG2-202ENST00000374676 PRO3102Q9H379 93 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 FZD8Q9H461 694 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 LMBRD1Q9NUN5 540 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 PHLPP2Q6ZVD8 1323 aa12.55□□□□□ -0.4
HSPG2-202ENST00000374676 PVALEFA0A1B0GWK0 134 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 H0YCG3 227 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 GOLGA6L22H0YM25 854 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 GTPBP6O43824 516 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-202ENST00000374676 CSDE1O75534 798 aaKnown RBP12.54□□□□□ -0.4
HSPG2-202ENST00000374676 MAPTP10636 758 aaKnown RBP12.54□□□□□ -0.4
HSPG2-202ENST00000374676 LIG1P18858 919 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 AFMP43652 599 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 MBTD1Q05BQ5 628 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 NFX1Q12986 1120 aaKnown RBP12.54□□□□□ -0.4
HSPG2-202ENST00000374676 IKBKEQ14164 716 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 FAM187BQ17R55 369 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 TCTN1Q2MV58 587 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 RASIP1Q5U651 963 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
HSPG2-202ENST00000374676 PPP4R3CPQ6ZMV5 832 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 CATSPER4Q7RTX7 472 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 SLC17A8Q8NDX2 589 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 PRIMPOLQ96LW4 560 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 PRMT7Q9NVM4 692 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-202ENST00000374676 ARHGAP28Q9P2N2 729 aa12.54□□□□□ -0.4
HSPG2-202ENST00000374676 RANBP2P49792 3224 aaKnown RBP12.53□□□□□ -0.4
HSPG2-202ENST00000374676 INO80B-WBP1J3KQ70 363 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 K7ERI5 159 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 ACKR2O00590 384 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 ENPP3O14638 875 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 TRAK2O60296 914 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 NR1I2O75469 434 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 IDEP14735 1019 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 AXLP30530 894 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 ABCD1P33897 745 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 CUL4BQ13620 913 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 DSC3Q14574 896 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 AMHR2Q16671 573 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-202ENST00000374676 UNC13DQ70J99 1090 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 FIZ1Q96SL8 496 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 CCDC113Q9H0I3 377 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 TSPYL2Q9H2G4 693 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-202ENST00000374676 MTIF3Q9H2K0 278 aaKnown RBP12.53□□□□□ -0.4
HSPG2-202ENST00000374676 ST6GALNAC4Q9H4F1 302 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 OLFML3Q9NRN5 406 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 PANK4Q9NVE7 773 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
HSPG2-202ENST00000374676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-202ENST00000374676 A0A1W2PPC1 479 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 SLC16A4O15374 487 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-202ENST00000374676 FGFR4P22455 802 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 ASIC1P78348 528 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 EHHADHQ08426 723 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 NCBP1Q09161 790 aaKnown RBP12.52□□□□□ -0.41
HSPG2-202ENST00000374676 SHHQ15465 462 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 MAPK6Q16659 721 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 CHRDL2Q6WN34 429 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 OTOP2Q7RTS6 562 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 ZNF720Q7Z2F6 126 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 HAUS6Q7Z4H7 955 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
HSPG2-202ENST00000374676 FAM178BQ8IXR5 827 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 GRAMD1CQ8IYS0 662 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 BLZF1Q9H2G9 400 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 ZHX3Q9H4I2 956 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 RGS18Q9NS28 235 aa12.52□□□□□ -0.41
HSPG2-202ENST00000374676 AGPAT5Q9NUQ2 364 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms