RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 WDR18Q9BV38 432 aa12.34□□□□□ -0.43
PTPN20-204ENST00000374346 TEKT3Q9BXF9 490 aa12.34□□□□□ -0.43
PTPN20-204ENST00000374346 TRIM31Q9BZY9 425 aa12.34□□□□□ -0.43
PTPN20-204ENST00000374346 TAOK3Q9H2K8 898 aa12.34□□□□□ -0.43
PTPN20-204ENST00000374346 ACTR5Q9H9F9 607 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-204ENST00000374346 LARSQ9P2J5 1176 aaKnown RBP12.34□□□□□ -0.43
PTPN20-204ENST00000374346 MRPL11Q9Y3B7 192 aaKnown RBP12.34□□□□□ -0.43
PTPN20-204ENST00000374346 CCDC169A6NNP5 214 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 GGPS1O95749 300 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 TRIM49P0CI25 452 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 TRIM49CP0CI26 452 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 FLT3P36888 993 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 COG2Q14746 738 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 MEX3CQ5U5Q3 659 aaKnown RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 GKAP1Q5VSY0 366 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 DENND2CQ68D51 928 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 MORC4Q8TE76 937 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 CHURC1Q8WUH1 139 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 RUNDC3BQ96NL0 473 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 GPR88Q9GZN0 384 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 CTTNBP2NLQ9P2B4 639 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 MTRF1LQ9UGC7 380 aaKnown RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 HERC5Q9UII4 1024 aaKnown RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 HNRNPH1P31943 449 aaKnown RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 MNAT1P51948 309 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 MAPK7Q13164 816 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 BYSLQ13895 437 aaKnown RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 TNIP1Q15025 636 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 KIAA1755Q5JYT7 1200 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 DACT2Q5SW24 774 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 SEL1L2Q5TEA6 688 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 FBXW10Q5XX13 1052 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 DUPD1Q68J44 220 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 CACNA2D3Q8IZS8 1091 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 P3H4Q92791 437 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 KAT2BQ92831 832 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 HOOK2Q96ED9 719 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 CSRNP1Q96S65 589 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 FIZ1Q96SL8 496 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 LXNQ9BS40 222 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 TRIM51Q9BSJ1 452 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 PABPC3Q9H361 631 aaKnown RBP12.33□□□□□ -0.44
PTPN20-204ENST00000374346 BCAS3Q9H6U6 928 aa12.33□□□□□ -0.44
PTPN20-204ENST00000374346 K7ENM7 598 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 PHF2O75151 1096 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 LRRN2O75325 713 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 VIL1P09327 827 aaKnown RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 NUDT17P0C025 328 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 MAPTP10636 758 aaKnown RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 PMS2P54278 862 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 GPC5P78333 572 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 DCAF12L1Q5VU92 463 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 CC2D2BQ6DHV5 1058 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 CPLX4Q7Z7G2 160 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 KSR1Q8IVT5 923 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 STMN4Q9H169 189 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 UBE2TQ9NPD8 197 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 ALG6Q9Y672 507 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 FOXN3O00409 490 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 ECE2O60344 883 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 TMOD1P28289 359 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 ACTN3Q08043 901 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 TCEAL1Q15170 157 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 PHLDB3Q6NSJ2 640 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 JAMLQ86YT9 394 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 RDH13Q8NBN7 331 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 CENPTQ96BT3 561 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 RIT2Q99578 217 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 TMOD2Q9NZR1 351 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 MTUS1Q9ULD2 1270 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 PCDHAC2Q9Y5I4 1007 aa12.32□□□□□ -0.44
PTPN20-204ENST00000374346 COL2A1P02458 1487 aaPredicted RBP12.32□□□□□ -0.44
PTPN20-204ENST00000374346 IGSF9BQ9UPX0 1349 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 TULP1O00294 542 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-204ENST00000374346 IPO5O00410 1097 aaKnown RBP12.31□□□□□ -0.44
PTPN20-204ENST00000374346 HIP1RO75146 1068 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
PTPN20-204ENST00000374346 VCAM1P19320 739 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 VAMP7P51809 220 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 PLTPP55058 493 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 CCDC174Q6PII3 467 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 C6orf89Q6UWU4 347 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
PTPN20-204ENST00000374346 OLIG1Q8TAK6 271 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 ATP8B4Q8TF62 1192 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 TMEM174Q8WUU8 243 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 PLVAPQ9BX97 442 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 WNT8AQ9H1J5 351 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
PTPN20-204ENST00000374346 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms