RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 KIF5CO60282 957 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 ATG7O95352 703 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 FGFR1OPO95684 399 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 CPP00450 1065 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 SUPT20HL2P0C7V6 817 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 NKX3-2P78367 333 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 PPP2R5CQ13362 524 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 CTTNQ14247 550 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 FOXR2Q6PJQ5 311 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 RABGGTAQ92696 567 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 DDX12PQ92771 950 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 CNOT6LQ96LI5 555 aaKnown RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 DNAJC7Q99615 494 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 FUT8Q9BYC5 575 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 ARFGAP3Q9NP61 516 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 WRAP73Q9P2S5 460 aaPredicted RBP15.64■□□□□ 0.09
HMGA1-203ENST00000374116 PCDHA10Q9Y5I2 948 aa15.64■□□□□ 0.09
HMGA1-203ENST00000374116 GRIN2DO15399 1336 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 TTC26A0AVF1 554 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 WDR64B1ANS9 1081 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 H3BRB1 525 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 PES1O00541 588 aaKnown RBP15.63■□□□□ 0.09
HMGA1-203ENST00000374116 ZEB2O60315 1214 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 KIAA0753Q2KHM9 967 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 TSR1Q2NL82 804 aaKnown RBP15.63■□□□□ 0.09
HMGA1-203ENST00000374116 SUGP1Q8IWZ8 645 aaKnown RBP15.63■□□□□ 0.09
HMGA1-203ENST00000374116 ZBTB10Q96DT7 871 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 DYDC2Q96IM9 177 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 TUT1Q9H6E5 874 aaKnown RBP15.63■□□□□ 0.09
HMGA1-203ENST00000374116 SLC39A2Q9NP94 309 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 LZTFL1Q9NQ48 299 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 STARD7Q9NQZ5 370 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 ADAM21Q9UKJ8 722 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 PHF24Q9UPV7 400 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 MRFAP1Q9Y605 127 aa15.63■□□□□ 0.09
HMGA1-203ENST00000374116 MYH9P35579 1960 aaKnown RBP15.62■□□□□ 0.09
HMGA1-203ENST00000374116 CCDC151A5D8V7 595 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 ZBTB39O15060 712 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 PSAPP07602 524 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 ATP4AP20648 1035 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 MTIF2P46199 727 aaKnown RBP15.62■□□□□ 0.09
HMGA1-203ENST00000374116 STAT5BP51692 787 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 BRD3Q15059 726 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 NBPF20Q3BBV1 942 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 MIS18BP1Q6P0N0 1132 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 HPS3Q969F9 1004 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 IQCDQ96DY2 449 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 GLT1D1Q96MS3 346 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 SEMA6BQ9H3T3 888 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 ZNF302Q9NR11 478 aa15.62■□□□□ 0.09
HMGA1-203ENST00000374116 MOXD2PA6NHM9 499 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 ZNF862O60290 1169 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 MED24O75448 989 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 SEC31AO94979 1220 aaKnown RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 HOXD8P13378 290 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 LRRC63Q05C16 580 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TBC1D8BQ0IIM8 1120 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TUBB2AQ13885 445 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 MFSD10Q14728 455 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TTC31Q49AM3 519 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 FAM47CQ5HY64 1035 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 DYMQ7RTS9 669 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TPH2Q8IWU9 490 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 HNRNPLLQ8WVV9 542 aaKnown RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 EIF2AK1Q9BQI3 630 aaKnown RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TSEN34Q9BSV6 310 aaKnown RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 MTG1Q9BT17 334 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TUBB2BQ9BVA1 445 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 NOC4LQ9BVI4 516 aaKnown RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 CARD6Q9BX69 1037 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 C11orf49Q9H6J7 331 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 AZI2Q9H6S1 392 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 MYO1AQ9UBC5 1043 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 KIAA1024Q9UPX6 916 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 IGKV6D-21A0A0A0MT36 114 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 F2P00734 622 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 COL6A1P12109 1028 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 RPA1P27694 616 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 PSEN1P49768 467 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 PSEN2P49810 448 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 JAK3P52333 1124 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 ZNF200P98182 395 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 MLLT1Q03111 559 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 ITGA7Q13683 1181 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 HIC1Q14526 733 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 FIGNQ5HY92 759 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 FKBP15Q5T1M5 1219 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 SWT1Q5T5J6 900 aaKnown RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 LEKR1Q6ZMV7 388 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 CATSPER3Q86XQ3 398 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 TRAPPC12Q8WVT3 735 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 ERGIC2Q96RQ1 377 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 BMP2KQ9NSY1 1161 aaPredicted RBP15.61■□□□□ 0.09
HMGA1-203ENST00000374116 JRKLQ9Y4A0 524 aa15.61■□□□□ 0.09
HMGA1-203ENST00000374116 STK24Q9Y6E0 443 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms