RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 CD53P19397 219 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 PON1P27169 355 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 MAPK8P45983 427 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 KLHL30Q0D2K2 578 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 SLC9C1Q4G0N8 1177 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 SYDE2Q5VT97 1194 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 IRF2BP2Q7Z5L9 587 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 RNF135Q8IUD6 432 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 TPH2Q8IWU9 490 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 SDR16C5Q8N3Y7 309 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 OGFOD1Q8N543 542 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 SH2D3CQ8N5H7 860 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 RDH13Q8NBN7 331 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 MKL1Q969V6 931 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 MASTLQ96GX5 879 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 APBA2Q99767 749 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 EIF2AK1Q9BQI3 630 aaKnown RBP6.96□□□□□ -1.29
CHD6-202ENST00000373222 AMNQ9BXJ7 453 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 RBCK1Q9BYM8 510 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 ARHGEF10LQ9HCE6 1279 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 NYAP2Q9P242 653 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 CHORDC1Q9UHD1 332 aaPredicted RBP6.96□□□□□ -1.29
CHD6-202ENST00000373222 ZMYM2Q9UBW7 1377 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 KIF13BQ9NQT8 1826 aa6.96□□□□□ -1.29
CHD6-202ENST00000373222 DOCK5Q9H7D0 1870 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 COL4A5P29400 1685 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 KDM3AQ9Y4C1 1321 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 CYP3A7-CYP3A51PA0A087WV96 503 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 SHTN1A0MZ66 631 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 CCDC66A2RUB6 948 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 CFAP99D6REC4 459 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 PJA2O43164 708 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 TGFB1I1O43294 461 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 RAD17O75943 681 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 KRT14P02533 472 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 SERPING1P05155 500 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 TRIM49P0CI25 452 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 TRIM49CP0CI26 452 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 BMP3P12645 472 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 UCHL3P15374 230 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 CYP3A7P24462 503 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 RPA1P27694 616 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 PPP1R2P41236 205 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 EPS15P42566 896 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 USP11P51784 963 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 GUCY2FP51841 1108 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 INSM1Q01101 510 aaPredicted RBP6.96□□□□□ -1.3
CHD6-202ENST00000373222 CKAP4Q07065 602 aaKnown RBP6.96□□□□□ -1.3
CHD6-202ENST00000373222 SLC18A3Q16572 532 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 KNOP1Q1ED39 458 aaKnown RBP6.96□□□□□ -1.3
CHD6-202ENST00000373222 KCTD16Q68DU8 428 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 LRRC31Q6UY01 552 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 EPM2AIP1Q7L775 607 aaPredicted RBP6.96□□□□□ -1.3
CHD6-202ENST00000373222 PALB2Q86YC2 1186 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 PGBD3Q8N328 593 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 IFT81Q8WYA0 676 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 ARL8AQ96BM9 186 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 DYDC2Q96IM9 177 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 MBOAT7Q96N66 472 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 NOX5Q96PH1 765 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 KRT12Q99456 494 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 TSGA10Q9BZW7 698 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 SIX2Q9NPC8 291 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 NFU1Q9UMS0 254 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 DNM3Q9UQ16 869 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 ZNFX1Q9P2E3 1918 aaKnown RBP6.96□□□□□ -1.3
CHD6-202ENST00000373222 BRCA2P51587 3418 aa6.96□□□□□ -1.3
CHD6-202ENST00000373222 ABCB11O95342 1321 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 MYO3BQ8WXR4 1341 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 RBAK-RBAKDNI3L0D1 243 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 DKK1O94907 266 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 ARP10275 920 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 ATF4P18848 351 aaPredicted RBP6.95□□□□□ -1.3
CHD6-202ENST00000373222 ALDH1B1P30837 517 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 ACTN2P35609 894 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 SREBF1P36956 1147 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 HSP90B2PQ58FF3 399 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 RINT1Q6NUQ1 792 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 TMEM179Q6ZVK1 233 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 PODNQ7Z5L7 613 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 PCGF5Q86SE9 256 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 DDX42Q86XP3 938 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD6-202ENST00000373222 KLHL7Q8IXQ5 586 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 TXLNBQ8N3L3 684 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 MMGT1Q8N4V1 131 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 SYT2Q8N9I0 419 aaPredicted RBP6.95□□□□□ -1.3
CHD6-202ENST00000373222 OLIG1Q8TAK6 271 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 FAM71BQ8TC56 605 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 DCAF4Q8WV16 495 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 SLC35C1Q96A29 364 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 FAM84AQ96KN4 292 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 CCDC17Q96LX7 622 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 ALS2CR12Q96Q35 445 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 MKNK1Q9BUB5 465 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 IDI2Q9BXS1 227 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 AP1M1Q9BXS5 423 aa6.95□□□□□ -1.3
CHD6-202ENST00000373222 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
CHD6-202ENST00000373222 AVENQ9NQS1 362 aaPredicted RBP6.95□□□□□ -1.3
CHD6-202ENST00000373222 ARMCX3Q9UH62 379 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms