RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 GIT2Q14161 759 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ANKRD20A2Q5SQ80 823 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ANKRD20A1Q5TYW2 823 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ANKRD20A3Q5VUR7 823 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 SPATA21Q7Z572 469 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 CATSPER3Q86XQ3 398 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 CPNE8Q86YQ8 564 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 PRELID2Q8N945 189 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 SAAL1Q96ER3 474 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 RMDN2Q96LZ7 410 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 STMN4Q9H169 189 aaPredicted RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 BATF3Q9NR55 127 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 USP17L10C9JJH3 530 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 MPHOSPH10O00566 681 aaKnown RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 PHF2O75151 1096 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 LMNB1P20700 586 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 SLC12A3P55017 1021 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 COG2Q14746 738 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ZC2HC1CQ53FD0 456 aaPredicted RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 TBC1D9BQ66K14 1250 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ZNF483Q8TF39 744 aaPredicted RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 IFT74Q96LB3 600 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 LBHD1Q9BQE6 289 aaPredicted RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 BHMT2Q9H2M3 363 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 SPATS2LQ9NUQ6 558 aaKnown RBP12.91□□□□□ -0.34
SNX21-205ENST00000372547 DNM3Q9UQ16 869 aa12.91□□□□□ -0.34
SNX21-205ENST00000372547 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 H0Y3Z8 333 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 PDHA1P08559 390 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 TMEM253P0C7T8 217 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 STX2P32856 288 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 IRX1P78414 480 aaPredicted RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 PPATQ06203 517 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 ZDHHC14Q8IZN3 488 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 PARD3BQ8TEW8 1205 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 SLC20A1Q8WUM9 679 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 TGS1Q96RS0 853 aaKnown RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 ADAM22Q9P0K1 906 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 VCAM1P19320 739 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 CALRP27797 417 aaKnown RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 PTGIRP43119 386 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 NPEPPSP55786 919 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 CALCOCO2Q13137 446 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
SNX21-205ENST00000372547 PTF1AQ7RTS3 328 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 UBL4BQ8N7F7 174 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 RUSC1Q9BVN2 902 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 ANKRD2Q9GZV1 360 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.34
SNX21-205ENST00000372547 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 SLURP2P0DP57 97 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
SNX21-205ENST00000372547 SNAP25P60880 206 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 GSTO1P78417 241 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 SEL1L2Q5TEA6 688 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 THEMIS2Q5TEJ8 643 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 FOXR2Q6PJQ5 311 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
SNX21-205ENST00000372547 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 PIGOQ8TEQ8 1089 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 PWWP2AQ96N64 755 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 CDC42EP4Q9H3Q1 356 aaKnown RBP12.89□□□□□ -0.35
SNX21-205ENST00000372547 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 TRAF3IP3Q9Y228 551 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 ASTN1O14525 1302 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 PFASO15067 1338 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 PNMA6FA0A0J9YX94 578 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
SNX21-205ENST00000372547 BRAFP15056 766 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 BNIP1Q12981 228 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 SRRM1Q8IYB3 904 aaKnown RBP12.89□□□□□ -0.35
SNX21-205ENST00000372547 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 OSBPL1AQ9BXW6 950 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 KLHL14Q9P2G3 628 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 ASIC3Q9UHC3 531 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 INTUQ9ULD6 942 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 ARL2BPQ9Y2Y0 163 aa12.89□□□□□ -0.35
SNX21-205ENST00000372547 PDXKO00764 312 aa12.88□□□□□ -0.35
SNX21-205ENST00000372547 SPOPO43791 374 aa12.88□□□□□ -0.35
SNX21-205ENST00000372547 SMNDC1O75940 238 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNX21-205ENST00000372547 FTLP02792 175 aaPredicted RBP12.88□□□□□ -0.35
SNX21-205ENST00000372547 PYGMP11217 842 aa12.88□□□□□ -0.35
SNX21-205ENST00000372547 AKR1B1P15121 316 aa12.88□□□□□ -0.35
SNX21-205ENST00000372547 CHRNA3P32297 505 aa12.88□□□□□ -0.35
SNX21-205ENST00000372547 ZNF131P52739 623 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms