RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 EXOSC4Q9NPD3 245 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 NMD3Q96D46 503 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 DBNDD2Q9BQY9 259 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 FAM32AQ9Y421 112 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 RNF103O00237 685 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 DDIASQ8IXT1 998 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 KIF2BQ8N4N8 673 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 SPRTNQ9H040 489 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 MICAL3Q7RTP6 2002 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 MYBL1P10243 752 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 SFSWAPQ12872 951 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 OR8H2Q8N162 312 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 TNIP2Q8NFZ5 429 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 A0A087WWV3 80 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 ENO3P13929 434 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 PSMA2P25787 234 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 HADHAP40939 763 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 ARMC3Q5W041 872 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 CENPPQ6IPU0 288 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 RSRC2Q7L4I2 434 aaKnown RBP16.18■□□□□ 0.18
COL5A1-201ENST00000371817 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 ANAPC7Q9UJX3 599 aa16.18■□□□□ 0.18
COL5A1-201ENST00000371817 AP3B1O00203 1094 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 GLG1Q92896 1179 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 TADA1Q96BN2 335 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ULK4Q96C45 1275 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 MTO1Q9Y2Z2 717 aaKnown RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 MYH8P13535 1937 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 LRRIQ4A6NIV6 560 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 CROCCP3Q8IVE0 287 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 FAM187AA6NFU0 413 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 NUP93Q8N1F7 819 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 PPM1NQ8N819 430 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 CHAMP1Q96JM3 812 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 RPAP3Q9H6T3 665 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ESYT3A0FGR9 886 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ADD1P35611 737 aaKnown RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 POU5F1BQ06416 359 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 PPP1R14BQ96C90 147 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 LBHD1Q9BQE6 289 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 FNDC3AQ9Y2H6 1198 aaKnown RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 PDZK1P1A8MUH7 402 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ARL13BQ3SXY8 428 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 SIX5Q8N196 739 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 OSBPL5Q9H0X9 879 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 EIF2S1P05198 315 aaKnown RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 GYS1P13807 737 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 STAT4Q14765 748 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 CCDC137Q6PK04 289 aaKnown RBP16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 LCA5LO95447 670 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ARID5BQ14865 1188 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ANKRD7Q92527 254 aa16.17■□□□□ 0.18
COL5A1-201ENST00000371817 ZCCHC18P0CG32 403 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 C20orf96Q9NUD7 363 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 C16orf72Q14CZ0 275 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 FAM149B1Q96BN6 582 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 ABCF3Q9NUQ8 709 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 ARPP21Q9UBL0 812 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 IPPQ9Y573 584 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 PHF20L1A8MW92 1017 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 CCT3P49368 545 aaKnown RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 ARHGEF16Q5VV41 709 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 CCDC81Q6ZN84 652 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 ALKBH8Q96BT7 664 aaKnown RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 GOLGA8TH3BQL2 631 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 SLC39A6Q13433 755 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 CTTNQ14247 550 aaKnown RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 ZNF786Q8N393 782 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 CNDP1Q96KN2 507 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 PPP1R36Q96LQ0 422 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 PRPF39Q86UA1 669 aaKnown RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 FAM47DPA6NHR8 397 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 DDX5P17844 614 aaKnown RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
COL5A1-201ENST00000371817 PLIN5Q00G26 463 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 ATP1A4Q13733 1029 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 PRUNE1Q86TP1 453 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
COL5A1-201ENST00000371817 LRIG3Q6UXM1 1119 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 MAGEB5Q9BZ81 275 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 TMEM206Q9H813 350 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 TTC7AQ9ULT0 858 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-201ENST00000371817 KLHL18O94889 574 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 ATP1A3P13637 1013 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 ITGA6P23229 1130 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 SERPINH1P50454 418 aaKnown RBP16.15■□□□□ 0.18
COL5A1-201ENST00000371817 PPARAQ07869 468 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 LAMC2Q13753 1193 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 NAA30Q147X3 362 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-201ENST00000371817 RBBP7Q16576 425 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
COL5A1-201ENST00000371817 ZBED8Q8IZ13 594 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms