RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CAVIN1Q6NZI2 390 aaKnown RBP17.6■□□□□ 0.41
PFDN4-201ENST00000371419 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
PFDN4-201ENST00000371419 C2orf40Q9H1Z8 148 aa17.6■□□□□ 0.41
PFDN4-201ENST00000371419 MAGEF1Q9HAY2 307 aa17.6■□□□□ 0.41
PFDN4-201ENST00000371419 KBTBD4Q9NVX7 518 aa17.6■□□□□ 0.41
PFDN4-201ENST00000371419 CXXC1Q9P0U4 656 aaPredicted RBP17.6■□□□□ 0.41
PFDN4-201ENST00000371419 TRIOBPQ9H2D6 2365 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 MYMKA6NI61 221 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 SFI1A8K8P3 1242 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 PLS3P13797 630 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 FGFR4P22455 802 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 SYKP43405 635 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 KCNJ6P48051 423 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 NDUFA8P51970 172 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 PEX3P56589 373 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 AMPD3Q01432 767 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 PCBP1Q15365 356 aaKnown RBP eCLIP17.59■□□□□ 0.41
PFDN4-201ENST00000371419 CDCA2Q69YH5 1023 aaPredicted RBP17.59■□□□□ 0.41
PFDN4-201ENST00000371419 CATSPER4Q7RTX7 472 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 ZBTB8OSQ8IWT0 167 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 DEPTORQ8TB45 409 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 DDX12PQ92771 950 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 TMX1Q9H3N1 280 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 MINDY3Q9H8M7 445 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 LARSQ9P2J5 1176 aaKnown RBP17.59■□□□□ 0.41
PFDN4-201ENST00000371419 USP25Q9UHP3 1055 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 KCNG1Q9UIX4 513 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 SLC4A7Q9Y6M7 1214 aa17.59■□□□□ 0.41
PFDN4-201ENST00000371419 CCDC169A6NNP5 214 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 INO80B-WBP1J3KQ70 363 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 TBCAO75347 108 aaKnown RBP17.58■□□□□ 0.41
PFDN4-201ENST00000371419 FAM13AO94988 1023 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 NPTX2P47972 431 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 MRE11P49959 708 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 WDR5P61964 334 aaKnown RBP17.58■□□□□ 0.41
PFDN4-201ENST00000371419 MBTD1Q05BQ5 628 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 DYMQ7RTS9 669 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 CEP57L1Q8IYX8 460 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 GOLPH3LQ9H4A5 285 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 PARVGQ9HBI0 331 aa17.58■□□□□ 0.41
PFDN4-201ENST00000371419 ENPP3O14638 875 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 SLFN14P0C7P3 912 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 ZNF131P52739 623 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 SMTNP53814 917 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 ZSCAN23Q3MJ62 389 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 STAMQ92783 540 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 DNAJC19Q96DA6 116 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 NTPCRQ9BSD7 190 aaKnown RBP17.57■□□□□ 0.4
PFDN4-201ENST00000371419 KIFC3Q9BVG8 833 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 KMT5AQ9NQR1 393 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 CHST12Q9NRB3 414 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 SERTAD1Q9UHV2 236 aa17.57■□□□□ 0.4
PFDN4-201ENST00000371419 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 DENND3A2RUS2 1198 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ACTN4O43707 911 aaKnown RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ERLIN2O94905 339 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 AMHP03971 560 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ZSCAN20P17040 1043 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 EFNA5P52803 228 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 DSC3Q14574 896 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 LONRF3Q496Y0 759 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.56■□□□□ 0.49e-8■□□□□ 10.9
PFDN4-201ENST00000371419 RTN4RL1Q86UN2 441 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 MYCT1Q8N699 235 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 PHOSPHO2Q8TCD6 241 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 SLC9A7Q96T83 725 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ADAM2Q99965 735 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 TSPYL2Q9H2G4 693 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 MICAL3Q7RTP6 2002 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ADGRA3Q8IWK6 1321 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 MGEA5O60502 916 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ATP2A2P16615 1042 aaKnown RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 DEFB103AP81534 67 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 NCBP1Q09161 790 aaKnown RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 MAPK6Q16659 721 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 LINC01599Q8WXQ3 324 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 C7orf25Q9BPX7 421 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 TRIM9Q9C026 710 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 FZD8Q9H461 694 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 RGS18Q9NS28 235 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 AGPAT5Q9NUQ2 364 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 PRMT7Q9NVM4 692 aaPredicted RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 ARHGAP28Q9P2N2 729 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 PIN4Q9Y237 131 aaKnown RBP17.56■□□□□ 0.4
PFDN4-201ENST00000371419 MYH11P35749 1972 aa17.56■□□□□ 0.4
PFDN4-201ENST00000371419 LAMA3Q16787 3333 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 PHLPP2Q6ZVD8 1323 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 K7ERI5 159 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 SLC16A4O15374 487 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 TSPAN1O60635 241 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 GADD45BO75293 160 aaPredicted RBP17.55■□□□□ 0.4
PFDN4-201ENST00000371419 ZNF202O95125 648 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 LETM1O95202 739 aaPredicted RBP17.55■□□□□ 0.4
PFDN4-201ENST00000371419 IDEP14735 1019 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 GAP43P17677 238 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 AFMP43652 599 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 AMHR2Q16671 573 aa17.55■□□□□ 0.4
PFDN4-201ENST00000371419 FAM187BQ17R55 369 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms