RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 UPF3AQ9H1J1 476 aaKnown RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 CARD9Q9H257 536 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 C10orf88Q9H8K7 445 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 C6orf203Q9P0P8 240 aaPredicted RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 ORC4O43929 436 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 ADCY3O60266 1144 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 CDH16O75309 829 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 HSPA4LO95757 839 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 POLR2BP30876 1174 aaKnown RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 PIK3CAP42336 1068 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 HERVK_113P62684 666 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 KYNUQ16719 465 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 BZW1Q7L1Q6 419 aaKnown RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 NRDE2Q9H7Z3 1164 aa13.52□□□□□ -0.25
GPC4-201ENST00000370828 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.25
GPC4-201ENST00000370828 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 B2RBV5 119 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 HNRNPCL1O60812 293 aaKnown RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 GAP43P17677 238 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 STX1BP61266 288 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 STK4Q13043 487 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 ZCWPW2Q504Y3 356 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.51□□□□□ -0.25
GPC4-201ENST00000370828 TTC25Q96NG3 672 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 KCNG1Q9UIX4 513 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 FAM47DPA6NHR8 397 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 GNGT2O14610 69 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 PECAM1P16284 738 aaPredicted RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 EAPPQ56P03 285 aaPredicted RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 ZNF564Q8TBZ8 553 aaPredicted RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 BHMT2Q9H2M3 363 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 TMEM165Q9HC07 324 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 ANKFY1Q9P2R3 1169 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 E9PMD0 336 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 RPS6KA5O75582 802 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 ICA1Q05084 483 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 GPS1Q13098 491 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 FLOT2Q14254 428 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 STAT4Q14765 748 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 RARS2Q5T160 578 aaKnown RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 RINT1Q6NUQ1 792 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 PPM1NQ8N819 430 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 GLG1Q92896 1179 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 KRT82Q9NSB4 513 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 RASGRF1Q13972 1273 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 PFKFB3Q16875 520 aaPredicted RBP13.51□□□□□ -0.25
GPC4-201ENST00000370828 DNAJC24Q6P3W2 148 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 DEPDC1BQ8WUY9 529 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 ANKS1AQ92625 1134 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 NUP85Q9BW27 656 aa13.51□□□□□ -0.25
GPC4-201ENST00000370828 TRPM1Q7Z4N2 1603 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 NR3C1P04150 777 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 SLC16A2P36021 539 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 ATP11CQ8NB49 1132 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 ERP44Q9BS26 406 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 FAM129AQ9BZQ8 928 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 MARCOQ9UEW3 520 aaPredicted RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 CDK12Q9NYV4 1490 aaPredicted RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 A0A0U1RQJ8 604 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GOLGA8IPA6NC78 632 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GOLGA8JA6NMD2 632 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GET4Q7L5D6 327 aaPredicted RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 SGMS1Q86VZ5 419 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 SFR1Q86XK3 245 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 TRIM50Q86XT4 487 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 TSEN2Q8NCE0 465 aaKnown RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 EPS8L3Q8TE67 593 aaKnown RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 NMD3Q96D46 503 aaKnown RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 TRIM9Q9C026 710 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 KCNJ1P48048 391 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GALCP54803 685 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 UBXN2AP68543 259 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 ST3GAL1Q11201 340 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 NAB2Q15742 525 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 THEMIS2Q5TEJ8 643 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 DAB2IPQ5VWQ8 1189 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.5□□□□□ -0.25
GPC4-201ENST00000370828 TBC1D23Q9NUY8 699 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GOLGA8QA0A0J9YX86 632 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GOLGA8OA6NCC3 632 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 GOLGA8NF8WBI6 632 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 H0YC42 278 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 NMT2O60551 498 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 PDE5AO76074 875 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 SEC24DO94855 1032 aaPredicted RBP13.5□□□□□ -0.25
GPC4-201ENST00000370828 FAM153BP0C7A2 387 aa13.5□□□□□ -0.25
GPC4-201ENST00000370828 MRPS15P82914 257 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms