RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 SUN2Q9UH99 717 aa19.2■□□□□ 0.66
CHRNA4-201ENST00000370263 DBR1Q9UK59 544 aaKnown RBP19.2■□□□□ 0.66
CHRNA4-201ENST00000370263 SPDYE16A6NNV3 312 aaPredicted RBP19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 PHF2O75151 1096 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 ATICP31939 592 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 SPDYE2Q495Y8 402 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 TMTC4Q5T4D3 741 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 VCPKMTQ9H867 229 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 SMARCAL1Q9NZC9 954 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 L3MBTL1Q9Y468 752 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 RHOT1Q8IXI2 618 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 RANBP17Q9H2T7 1088 aaKnown RBP19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 USP6P35125 1406 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 KDM1AO60341 852 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 KDSRQ06136 332 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 LONRF1Q17RB8 773 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 TMEM35BQ8NCS4 154 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 ENGASEQ8NFI3 743 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 AP3B2Q13367 1082 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 SPICE1Q8N0Z3 855 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 ATL2Q8NHH9 583 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 ROPN1BQ9BZX4 212 aaPredicted RBP19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 ROPN1Q9HAT0 212 aaPredicted RBP19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 PI4K2BG5E9Z4 385 aa19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 CYLC2Q14093 348 aaPredicted RBP19.19■□□□□ 0.66
CHRNA4-201ENST00000370263 CDHR2Q9BYE9 1310 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 FAM47DPA6NHR8 397 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 ENO1P06733 434 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 BMP3P12645 472 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 MECOMQ03112 1051 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 ZNF746Q6NUN9 644 aaPredicted RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 VPS39Q96JC1 886 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 CYP26B1Q9NR63 512 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 CALB1P05937 261 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 ALDH1B1P30837 517 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 FRMD5Q7Z6J6 570 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 DHX38Q92620 1227 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 C11orf70Q9BRQ4 267 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 MOV10L1Q9BXT6 1211 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 SLC13A1Q9BZW2 595 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 NPHS2Q9NP85 383 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 XDHP47989 1333 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 LRRIQ3A6PVS8 624 aaPredicted RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 H3BQF6 201 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 M0QZ92 97 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 PSMC1P62191 440 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 CYTH1Q15438 398 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 MYBL1P10243 752 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 SURF1Q15526 300 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 SYDE2Q5VT97 1194 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 STX18Q9P2W9 335 aaKnown RBP19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 NOD1Q9Y239 953 aa19.18■□□□□ 0.66
CHRNA4-201ENST00000370263 PPP1R12AO14974 1030 aaPredicted RBP19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 ITIH2P19823 946 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 SERPINB3P29508 390 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 CTCFP49711 727 aaPredicted RBP19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 NBPF3Q9H094 633 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 CDK8P49336 464 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 USP38Q8NB14 1042 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 PIGOQ8TEQ8 1089 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 TEKT4Q8WW24 435 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 LAMC1P11047 1609 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 TMEM120BA0PK00 339 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 KIAA0825Q8IV33 1275 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 TSSK1BQ9BXA7 367 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 AS3MTQ9HBK9 375 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 PPME1Q9Y570 386 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 VHLP40337 213 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 EFTUD2Q15029 972 aaKnown RBP eCLIP19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 UBN1Q9NPG3 1134 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 PDP2Q9P2J9 529 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 A0A1W2PQJ5 194 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 E2F6O75461 281 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 TRIM9Q9C026 710 aa19.17■□□□□ 0.66
CHRNA4-201ENST00000370263 ACADSP16219 412 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 BBS5Q8N3I7 341 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 TBC1D23Q9NUY8 699 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 IP6K2Q9UHH9 426 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 KCNA4P22459 653 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 PEX3P56589 373 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 TRAPPC11Q7Z392 1133 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 ALG13Q9NP73 1137 aaKnown RBP19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 GTSE1Q9NYZ3 720 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 ARHGDIAP52565 204 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 OLFML2BQ68BL8 750 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 ELOA2Q8IYF1 753 aaPredicted RBP19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 ARL8AQ96BM9 186 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 FUCA2Q9BTY2 467 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 CCSER1Q9C0I3 900 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 PALMDQ9NP74 551 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 POTEB3A0JP26 581 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 POTECB2RU33 542 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 INO80B-WBP1J3KQ70 363 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 ARHGEF9O43307 516 aa19.16■□□□□ 0.66
CHRNA4-201ENST00000370263 GUCY1A2P33402 732 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms