RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ZNF668Q96K58 619 aaPredicted RBP17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 FTHL17Q9BXU8 183 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 ZHX3Q9H4I2 956 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 POLD4Q9HCU8 107 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 KMT5AQ9NQR1 393 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 PADI3Q9ULW8 664 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 PVALEFA0A1B0GWK0 134 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 GTPBP6O43824 516 aaPredicted RBP17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 TRAK2O60296 914 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 EFCAB14O75071 495 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 MAPTP10636 758 aaKnown RBP17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 IDEP14735 1019 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 ASIC1P78348 528 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 PRPF38BQ5VTL8 546 aaKnown RBP17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 FAM228AQ86W67 206 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 DBF4BQ8NFT6 615 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 PRIMPOLQ96LW4 560 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 GDF15Q99988 308 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 AGO3Q9H9G7 860 aaKnown RBP17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 ERVK-5Q9HDB9 667 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 PANK4Q9NVE7 773 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 ARHGAP28Q9P2N2 729 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 ST3GAL5Q9UNP4 418 aa17.15■□□□□ 0.34
PRPF38B-202ENST00000370022 SIP14410 1827 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 INO80B-WBP1J3KQ70 363 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 BAIAP3O94812 1187 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 FGBP02675 491 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 CD52P31358 61 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 NCKAP1LP55160 1127 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 NFX1Q12986 1120 aaKnown RBP17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 UNC13DQ70J99 1090 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 VWCEQ96DN2 955 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 TMEM134Q9H6X4 195 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 OLFML3Q9NRN5 406 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 PRMT7Q9NVM4 692 aaPredicted RBP17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
PRPF38B-202ENST00000370022 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 ERLIN2O94905 339 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 BMP8BP34820 402 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 CUL4BQ13620 913 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 IKBKEQ14164 716 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 POSTNQ15063 836 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 MAPK6Q16659 721 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 FAM187BQ17R55 369 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 HERC4Q5GLZ8 1057 aaPredicted RBP17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 C16orf59Q7L2K0 433 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 CATSPER4Q7RTX7 472 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 FAM178BQ8IXR5 827 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 GRAMD1CQ8IYS0 662 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 BLZF1Q9H2G9 400 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 MTIF3Q9H2K0 278 aaKnown RBP17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 FZD8Q9H461 694 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 ST6GALNAC4Q9H4F1 302 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 CHST12Q9NRB3 414 aa17.13■□□□□ 0.33
PRPF38B-202ENST00000370022 ADGRA3Q8IWK6 1321 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 K7ERI5 159 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 ACRP10323 421 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 AXLP30530 894 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 EPHB4P54760 987 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 TMEM240Q5SV17 173 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 SFR1Q86XK3 245 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 TMEM161BQ8NDZ6 487 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 KIFC3Q9BVG8 833 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 UBE2OQ9C0C9 1292 aaKnown RBP17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 CCDC113Q9H0I3 377 aa17.12■□□□□ 0.33
PRPF38B-202ENST00000370022 SLC16A4O15374 487 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 MCM4P33991 863 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 DPYDQ12882 1025 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 COASYQ13057 564 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 ALCAMQ13740 583 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 HAUS6Q7Z4H7 955 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 CCDC47Q96A33 483 aaKnown RBP17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 FIZ1Q96SL8 496 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.337e-8■■■□□ 19.2
PRPF38B-202ENST00000370022 MRPL44Q9H9J2 332 aaKnown RBP17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 AGPAT5Q9NUQ2 364 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 K7ENM7 598 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 ACKR2O00590 384 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 MBD3O95983 291 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 PTMSP20962 102 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 STRN3Q13033 797 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 ZNF720Q7Z2F6 126 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 HERVK_113Q902F9 699 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 HVCN1Q96D96 273 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 PCDH10Q9P2E7 1040 aa17.11■□□□□ 0.33
PRPF38B-202ENST00000370022 CNTNAP2Q9UHC6 1331 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 DENND3A2RUS2 1198 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 TSPAN1O60635 241 aa17.1■□□□□ 0.33
PRPF38B-202ENST00000370022 PRKCBP05771 671 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms