RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TRIM16O95361 564 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CFAP73A6NFT4 308 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 RASSF10A6NK89 507 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 SFI1A8K8P3 1242 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 GDF11O95390 407 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 HOXA13P31271 388 aaPredicted RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 GPC5P78333 572 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 SNX24Q9Y343 169 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CALB1P05937 261 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CYP21A2P08686 494 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 DYNLL1P63167 89 aaKnown RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 TTC30AQ86WT1 665 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CATSPER1Q8NEC5 780 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 ADNPQ9H2P0 1102 aa13.24□□□□□ -0.29
HCFC1-202ENST00000369984 TLR7Q9NYK1 1049 aaKnown RBP13.24□□□□□ -0.29
HCFC1-202ENST00000369984 CEP55Q53EZ4 464 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 EEPD1Q7L9B9 569 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 TSR3Q9UJK0 312 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 FOSL2P15408 326 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ELF1P32519 619 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 DMC1Q14565 340 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 DDIASQ8IXT1 998 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 CCNYL1Q8N7R7 359 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 KANSL2Q9H9L4 492 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 PNMA6FA0A0J9YX94 578 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 PLEKHM3Q6ZWE6 761 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 MOSPD1Q9UJG1 213 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 HAUS5O94927 633 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 IL10P22301 178 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 CTTNQ14247 550 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 NAALADL2Q58DX5 795 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 COQ7Q99807 217 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 TCOF1Q13428 1488 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 STAP2Q9UGK3 403 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 AURKCQ9UQB9 309 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 CAPRIN2Q6IMN6 1127 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 SNF8Q96H20 258 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 SH3GL1Q99961 368 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 CNOT8Q9UFF9 292 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 PRPF3O43395 683 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 KIF1CO43896 1103 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 SEC24DO94855 1032 aaPredicted RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 GPR162Q16538 588 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ARHGAP18Q8N392 663 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 PIGOQ8TEQ8 1089 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 OTUB1Q96FW1 271 aaPredicted RBP13.23□□□□□ -0.29
HCFC1-202ENST00000369984 SLITRK6Q9H5Y7 841 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ETNK1Q9HBU6 452 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 ZSWIM5Q9P217 1185 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 SERPINB13Q9UIV8 391 aa13.23□□□□□ -0.29
HCFC1-202ENST00000369984 GOLGA8RI6L899 631 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ZNF394Q53GI3 561 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ARHGAP27Q6ZUM4 889 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 PRMT1Q99873 361 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 LDHAP00338 332 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ZNF555Q8NEP9 628 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ADCK1Q86TW2 530 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 KLC4Q9NSK0 619 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 PROM2Q8N271 834 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 LEMD3Q9Y2U8 911 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 MIF4GDA9UHW6 222 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 KCNQ3O43525 872 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 AARS2Q5JTZ9 985 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 BRIP1Q9BX63 1249 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 USP21Q9UK80 565 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 PRPF4O43172 522 aaKnown RBP eCLIP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 WDR47O94967 919 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 CD2BP2O95400 341 aaKnown RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 RECQLP46063 649 aaPredicted RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 AGR3Q8TD06 166 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
HCFC1-202ENST00000369984 RUBCNLQ9H714 662 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 UBE4BO95155 1302 aa13.22□□□□□ -0.29
HCFC1-202ENST00000369984 UBXN8O00124 270 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 ARFIP2P53365 341 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 PPM1NQ8N819 430 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 CCDC78A2IDD5 438 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 TMEM270Q6UE05 265 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 EGFL8Q99944 293 aa13.21□□□□□ -0.29
HCFC1-202ENST00000369984 DNAJC12Q9UKB3 198 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms