RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 TRPC6Q9Y210 931 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 SIK3Q9Y2K2 1263 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 MYH11P35749 1972 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 A0A1W2PQJ5 194 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 ZBTB42B2RXF5 422 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 CASP5P51878 434 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 CHMP4BP1P59074 171 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 MEA1Q16626 185 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 BRDTQ58F21 947 aaPredicted RBP18.98■□□□□ 0.63
UBE3D-203ENST00000369747 ZC3H3Q8IXZ2 948 aaKnown RBP18.98■□□□□ 0.63
UBE3D-203ENST00000369747 TRAPPC12Q8WVT3 735 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 BBXQ8WY36 941 aaPredicted RBP18.98■□□□□ 0.63
UBE3D-203ENST00000369747 CEP89Q96ST8 783 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 IRX2Q9BZI1 471 aaPredicted RBP18.98■□□□□ 0.63
UBE3D-203ENST00000369747 COL4A3BPQ9Y5P4 624 aa18.98■□□□□ 0.63
UBE3D-203ENST00000369747 SFI1A8K8P3 1242 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 KIF20AO95235 890 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 F2P00734 622 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 MYL3P08590 195 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 CASQ1P31415 396 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 ZBED6P86452 979 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 MTFR1Q15390 333 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 TARBP2Q15633 366 aaKnown RBP18.97■□□□□ 0.63
UBE3D-203ENST00000369747 LHX8Q68G74 356 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 CTU1Q7Z7A3 348 aaKnown RBP18.97■□□□□ 0.63
UBE3D-203ENST00000369747 SFR1Q86XK3 245 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 FAM167AQ96KS9 214 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 CEP63Q96MT8 703 aa18.97■□□□□ 0.63
UBE3D-203ENST00000369747 RRP9O43818 475 aaKnown RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 SOX10P56693 466 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 PURAQ00577 322 aaKnown RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 EPM2AIP1Q7L775 607 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 PCMTD1Q96MG8 357 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 UNC93B1Q9H1C4 597 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 SPC25Q9HBM1 224 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 GPRC5CQ9NQ84 441 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 KCND2Q9NZV8 630 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 EPN1Q9Y6I3 576 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 NDUFA10O95299 355 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 GUCY2CP25092 1073 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 TSR1Q2NL82 804 aaKnown RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 DAW1Q8N136 415 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 LRRN4CLQ8ND94 238 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 ZBTB10Q96DT7 871 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 IQCDQ96DY2 449 aa18.96■□□□□ 0.63
UBE3D-203ENST00000369747 REXO2Q9Y3B8 237 aaKnown RBP18.96■□□□□ 0.63
UBE3D-203ENST00000369747 URI1O94763 535 aaPredicted RBP18.95■□□□□ 0.62
UBE3D-203ENST00000369747 INSRRP14616 1297 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 HOXD13P35453 343 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 MARSP56192 900 aaKnown RBP18.95■□□□□ 0.62
UBE3D-203ENST00000369747 NKX3-2P78367 333 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 MAPK7Q13164 816 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 KIAA0753Q2KHM9 967 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 CXCL17Q6UXB2 119 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 MTERF4Q7Z6M4 381 aaKnown RBP18.95■□□□□ 0.62
UBE3D-203ENST00000369747 KLHDC9Q8NEP7 349 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 MAP7D2Q96T17 732 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.95■□□□□ 0.62
UBE3D-203ENST00000369747 XPNPEP1Q9NQW7 623 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 PDLIM7Q9NR12 457 aa18.95■□□□□ 0.62
UBE3D-203ENST00000369747 HBP1O60381 514 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 HIP1RO75146 1068 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 DGAT1O75907 488 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 ABL1P00519 1130 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 ARHGAP25P42331 645 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 POLGP54098 1239 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-203ENST00000369747 IGBP1P78318 339 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 EDRF1Q3B7T1 1238 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 CCDC40Q4G0X9 1142 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 PPP4R3CPQ6ZMV5 832 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 DHX33Q9H6R0 707 aaKnown RBP18.94■□□□□ 0.62
UBE3D-203ENST00000369747 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.94■□□□□ 0.62
UBE3D-203ENST00000369747 V9GYY5 206 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-203ENST00000369747 EPHB6O15197 1021 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 MSCO60682 206 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 GNA14O95837 355 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 MYBP10242 640 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 HSP90AA2PQ14568 343 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-203ENST00000369747 KCNA10Q16322 511 aa18.94■□□□□ 0.62
UBE3D-203ENST00000369747 CCSAPQ6IQ19 270 aaPredicted RBP18.94■□□□□ 0.62
UBE3D-203ENST00000369747 TBCAO75347 108 aaKnown RBP18.93■□□□□ 0.62
UBE3D-203ENST00000369747 ASGR1P07306 291 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 MFSD10Q14728 455 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 EMC2Q15006 297 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 KNOP1Q1ED39 458 aaKnown RBP18.93■□□□□ 0.62
UBE3D-203ENST00000369747 BMT2Q1RMZ1 405 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 ARHGAP29Q52LW3 1261 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 FAM102BQ5T8I3 360 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-203ENST00000369747 SLC7A3Q8WY07 619 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 TRAF3IP3Q9Y228 551 aa18.93■□□□□ 0.62
UBE3D-203ENST00000369747 HAS3O00219 553 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 KIF5CO60282 957 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 ADAM9Q13443 819 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 DRP2Q13474 957 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 TRIM59Q8IWR1 403 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 CCDC155Q8N6L0 562 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 ZNF397Q8NF99 534 aaPredicted RBP18.92■□□□□ 0.62
UBE3D-203ENST00000369747 PDCL3Q9H2J4 239 aa18.92■□□□□ 0.62
UBE3D-203ENST00000369747 ATP6V0A4Q9HBG4 840 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms