RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 SHBGP04278 402 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 TNFRSF8P28908 595 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 CTTNQ14247 550 aaKnown RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 NAF1Q96HR8 494 aaKnown RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 SELENOSQ9BQE4 189 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 NEUROG2Q9H2A3 272 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 OSGEPQ9NPF4 335 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 ZMYND8Q9ULU4 1186 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 hCG_2014768A0A024R1R8 64 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 ZBTB39O15060 712 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 DRD4P21917 467 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 UBXN2AP68543 259 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 ARHGAP44Q17R89 818 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 ZC2HC1CQ53FD0 456 aaPredicted RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 TPH2Q8IWU9 490 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 RBM41Q96IZ5 413 aaKnown RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 MTFR1LQ9H019 292 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 PCMTD2Q9NV79 361 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 FBXL5Q9UKA1 691 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 RREB1Q92766 1687 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 NAV1Q8NEY1 1877 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 RNASELQ05823 741 aaKnown RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 EDRF1Q3B7T1 1238 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 CDC42EP5Q6NZY7 148 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 FAM47EQ6ZV65 393 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 SLFN12Q8IYM2 578 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 MYCT1Q8N699 235 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 TPCN2Q8NHX9 752 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 P2RX7Q99572 595 aaKnown RBP17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 RUSC1Q9BVN2 902 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 PPP1R12CQ9BZL4 782 aa17.23■□□□□ 0.35
SYNCRIP-202ENST00000369622 UBOX5O94941 541 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 CLSTN1O94985 981 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 KRT16P08779 473 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 NMT1P30419 496 aaKnown RBP17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 HOXD13P35453 343 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 RFC5P40937 340 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 CYP2J2P51589 502 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 PPP2R2AP63151 447 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 KDM4CQ9H3R0 1056 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 DDX60LQ5H9U9 1706 aaKnown RBP17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 FAM86B1E9PN63 330 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 FGGP02679 453 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 FAM86B2P0C5J1 330 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 NOVP48745 357 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 ZNF211Q13398 564 aaPredicted RBP17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 TMX4Q9H1E5 349 aaPredicted RBP17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 ISCUQ9H1K1 167 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 KCNMB3Q9NPA1 279 aa17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 ATF5Q9Y2D1 282 aaPredicted RBP17.22■□□□□ 0.35
SYNCRIP-202ENST00000369622 IGKV6D-41A0A0C4DH26 115 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 BBOX1O75936 387 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 VIMP08670 466 aaKnown RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 CUL3Q13618 768 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 ANO7Q6IWH7 933 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 CRELD2Q6UXH1 353 aaPredicted RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 FRMD5Q7Z6J6 570 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 PBKQ96KB5 322 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■□□□□ 9.9
SYNCRIP-202ENST00000369622 TRIM51Q9BSJ1 452 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 ATP8A1Q9Y2Q0 1164 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 MEIS2O14770 477 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 ATP2A2P16615 1042 aaKnown RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 RPL13P26373 211 aaKnown RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 GALCP54803 685 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 DHX9Q08211 1270 aaKnown RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 KRT71Q3SY84 523 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 CERKLQ49MI3 558 aaPredicted RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 NCAPG2Q86XI2 1143 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 KCNQ5Q9NR82 932 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 DLGAP2Q9P1A6 1054 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 SWAP70Q9UH65 585 aa17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 BZW2Q9Y6E2 419 aaKnown RBP17.21■□□□□ 0.35
SYNCRIP-202ENST00000369622 TLDC2A0PJX2 215 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 H0Y3Z8 333 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 DDX3XO00571 662 aaKnown RBP eCLIP17.21■□□□□ 0.343e-18■■□□□ 13.2
SYNCRIP-202ENST00000369622 LRRN2O75325 713 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 FAM13AO94988 1023 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 SPATA31C1P0DKV0 1188 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 NQO1P15559 274 aaKnown RBP17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 STAT1P42224 750 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 GCLCP48506 637 aaPredicted RBP17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 MARSP56192 900 aaKnown RBP17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 COG2Q14746 738 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 HYIQ5T013 277 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 TMEM154Q6P9G4 183 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 LRRC45Q96CN5 670 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 LRRC4BQ9NT99 713 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 RABGAP1Q9Y3P9 1069 aa17.21■□□□□ 0.34
SYNCRIP-202ENST00000369622 TMEM110-MUSTN1A8MSY1 372 aa17.2■□□□□ 0.34
SYNCRIP-202ENST00000369622 ATP6V1G1O75348 118 aa17.2■□□□□ 0.34
SYNCRIP-202ENST00000369622 TRIM49P0CI25 452 aa17.2■□□□□ 0.34
SYNCRIP-202ENST00000369622 TRIM49CP0CI26 452 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms