RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RPS6KA5O75582 802 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 AKAP3O75969 853 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 MATR3P43243 847 aaKnown RBP eCLIP11.6□□□□□ -0.55
TPM3-212ENST00000368533 KRT76Q01546 638 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 GHRHRQ02643 423 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 GPRASP2Q96D09 838 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 DNAJC7Q99615 494 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 NUP58Q9BVL2 599 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 RBBP6Q7Z6E9 1792 aaKnown RBP11.6□□□□□ -0.55
TPM3-212ENST00000368533 DOCK3Q8IZD9 2030 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 PLEKP08567 350 aaPredicted RBP11.6□□□□□ -0.55
TPM3-212ENST00000368533 ACTN1P12814 892 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 ZBED6P86452 979 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 SATB1Q01826 763 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 VWA3BQ502W6 1294 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 ZCWPW2Q504Y3 356 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 CACNA2D4Q7Z3S7 1137 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 TRAPPC12Q8WVT3 735 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 BSNDQ8WZ55 320 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 FGD4Q96M96 766 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 FAM169AQ9Y6X4 670 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 RASSF10A6NK89 507 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 NR3C1P04150 777 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 TRIM49P0CI25 452 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 TRIM49CP0CI26 452 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 FECHP22830 423 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 DNA2P51530 1060 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 RRAGAQ7L523 313 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 EGFL6Q8IUX8 553 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 FAM133AQ8N9E0 248 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 GLG1Q92896 1179 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 ZIC5Q96T25 663 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 MMS19Q96T76 1030 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 GBP3Q9H0R5 595 aa11.6□□□□□ -0.55
TPM3-212ENST00000368533 MAP3K20Q9NYL2 800 aaKnown RBP11.6□□□□□ -0.55
TPM3-212ENST00000368533 SPATA31C2B4DYI2 1134 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 ZNF185O15231 689 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 TGFB1I1O43294 461 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 CPP00450 1065 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 ADORA2AP29274 412 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 IGBP1P78318 339 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 FAM43BQ6ZT52 329 aaPredicted RBP11.59□□□□□ -0.55
TPM3-212ENST00000368533 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 GSPT2Q8IYD1 628 aaKnown RBP11.59□□□□□ -0.55
TPM3-212ENST00000368533 SGSM3Q96HU1 749 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 FIZ1Q96SL8 496 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 MED4Q9NPJ6 270 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 FBXO40Q9UH90 709 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
TPM3-212ENST00000368533 PFASO15067 1338 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 MYPNQ86TC9 1320 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 RCCD1A6NED2 376 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 CETN3O15182 167 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 GJB1P08034 283 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 ATP4AP20648 1035 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 JAK3P52333 1124 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 DRP2Q13474 957 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 TDRD12Q587J7 1177 aaKnown RBP11.59□□□□□ -0.55
TPM3-212ENST00000368533 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 ZNF720Q7Z2F6 126 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 GPRC5AQ8NFJ5 357 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 AFAP1L1Q8TED9 768 aa11.59□□□□□ -0.55
TPM3-212ENST00000368533 LENG1Q96BZ8 264 aaPredicted RBP11.59□□□□□ -0.55
TPM3-212ENST00000368533 ZMYM2Q9UBW7 1377 aa11.58□□□□□ -0.55
TPM3-212ENST00000368533 NOP56O00567 594 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 LRRN2O75325 713 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 PSAPP07602 524 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 CETPP11597 493 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 PAX7P23759 505 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 TCF7P36402 384 aaPredicted RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 SPRYD7Q5W111 196 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 SAAL1Q96ER3 474 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 CBWD1Q9BRT8 395 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 IFIH1Q9BYX4 1025 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 ZNF302Q9NR11 478 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 CAPN7Q9Y6W3 813 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 SCN4AP35499 1836 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 HARSP12081 509 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 TUBB4BP68371 445 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 MRPS25P82663 173 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 MAN2A1Q16706 1144 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 GJB7Q6PEY0 223 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 GBP6Q6ZN66 633 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 DPP9Q86TI2 863 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 DNAAF5Q86Y56 855 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 LRRC71Q8N4P6 559 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 IVNS1ABPQ9Y6Y0 642 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 SOCS7O14512 581 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 FARP2O94887 1054 aaPredicted RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 SYF2O95926 243 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 TXNP10599 105 aaKnown RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 GTF2A2P52657 109 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 ZNF746Q6NUN9 644 aaPredicted RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 ABHD15Q6UXT9 468 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 EPM2AIP1Q7L775 607 aaPredicted RBP11.58□□□□□ -0.56
TPM3-212ENST00000368533 RETREG2Q8NC44 543 aa11.58□□□□□ -0.56
TPM3-212ENST00000368533 MSANTD4Q8NCY6 345 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms