RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CATSPER4Q7RTX7 472 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 SRGAP1Q7Z6B7 1085 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 FAM228AQ86W67 206 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 SEPT8Q92599 483 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 ERCC4Q92889 916 aaPredicted RBP15.34■□□□□ 0.05
TPM3-211ENST00000368531 CCDC34Q96HJ3 373 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 IFIH1Q9BYX4 1025 aaKnown RBP15.34■□□□□ 0.05
TPM3-211ENST00000368531 PADI3Q9ULW8 664 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 ST3GAL5Q9UNP4 418 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 ADGRA3Q8IWK6 1321 aa15.34■□□□□ 0.05
TPM3-211ENST00000368531 GPR182O15218 404 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 TRAK2O60296 914 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.04
TPM3-211ENST00000368531 NMT1P30419 496 aaKnown RBP15.33■□□□□ 0.04
TPM3-211ENST00000368531 ZNF131P52739 623 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 SMTNP53814 917 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 COASYQ13057 564 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 PNOCQ13519 176 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 POSTNQ15063 836 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 PLEKHG4Q58EX7 1191 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 ZNF365Q70YC5 407 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 C16orf59Q7L2K0 433 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 OTOP2Q7RTS6 562 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 FAM178BQ8IXR5 827 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 HPS3Q969F9 1004 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 VWCEQ96DN2 955 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 TIGD1Q96MW7 591 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 C2orf40Q9H1Z8 148 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 MRPL44Q9H9J2 332 aaKnown RBP15.33■□□□□ 0.04
TPM3-211ENST00000368531 C17orf75Q9HAS0 396 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 ERVK-5Q9HDB9 667 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 USP20Q9Y2K6 914 aa15.33■□□□□ 0.04
TPM3-211ENST00000368531 K7ENM7 598 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 K7ERI5 159 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 ERLIN2O94905 339 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 FGBP02675 491 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 CXCL10P02778 98 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 GAP43P17677 238 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.04
TPM3-211ENST00000368531 MBTD1Q05BQ5 628 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 CAMK4Q16566 473 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 TMEM132AQ24JP5 1023 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 GPT2Q8TD30 523 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 UBE2OQ9C0C9 1292 aaKnown RBP15.32■□□□□ 0.04
TPM3-211ENST00000368531 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
TPM3-211ENST00000368531 DENND3A2RUS2 1198 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 GCNT3O95395 438 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 RPN1P04843 607 aaKnown RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 PRKCBP05771 671 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 ACTN1P12814 892 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 DPYDQ12882 1025 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 IKBKEQ14164 716 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 MAPK6Q16659 721 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 KMT5BQ4FZB7 885 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 ZC2HC1CQ53FD0 456 aaPredicted RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 TMEM240Q5SV17 173 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 CDCA2Q69YH5 1023 aaPredicted RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 CNNM4Q6P4Q7 775 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 CNKSR3Q6P9H4 555 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 HAUS6Q7Z4H7 955 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 TMEM161BQ8NDZ6 487 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 SPIRE2Q8WWL2 714 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 CPB2Q96IY4 423 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.31■□□□□ 0.043e-15■■■□□ 16.8
TPM3-211ENST00000368531 NTPCRQ9BSD7 190 aaKnown RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 KCNG1Q9UIX4 513 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 HOOK1Q9UJC3 728 aaKnown RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 PIN4Q9Y237 131 aaKnown RBP15.31■□□□□ 0.04
TPM3-211ENST00000368531 MICAL3Q7RTP6 2002 aa15.31■□□□□ 0.04
TPM3-211ENST00000368531 PVALEFA0A1B0GWK0 134 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 ZBBXA8MT70 800 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 B4GALT5O43286 388 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 KLRC4O43908 158 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 PFKMP08237 780 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 EFNA5P52803 228 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 NCKAP1LP55160 1127 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 CDR2LQ86X02 465 aaPredicted RBP15.3■□□□□ 0.04
TPM3-211ENST00000368531 CCDC47Q96A33 483 aaKnown RBP15.3■□□□□ 0.04
TPM3-211ENST00000368531 ADAM2Q99965 735 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 GDF15Q99988 308 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 NFKBIZQ9BYH8 718 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 FGFBP2Q9BYJ0 223 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 CCDC113Q9H0I3 377 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 SLC39A2Q9NP94 309 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 PRMT7Q9NVM4 692 aaPredicted RBP15.3■□□□□ 0.04
TPM3-211ENST00000368531 ARHGAP28Q9P2N2 729 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 SEL1LQ9UBV2 794 aa15.3■□□□□ 0.04
TPM3-211ENST00000368531 PHLPP2Q6ZVD8 1323 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 TTLL13PA6NNM8 815 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 MGEA5O60502 916 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 TSPAN1O60635 241 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 EDN1P05305 212 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 MYL1P05976 194 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms