RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CROCCP2Q86T23 111 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 DAAM2Q86T65 1068 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 DAW1Q8N136 415 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 UBL4BQ8N7F7 174 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 MCPH1Q8NEM0 835 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
TPM3-209ENST00000368527 HES6Q96HZ4 224 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 UIMC1Q96RL1 719 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 RAB17Q9H0T7 212 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 FAM114A2Q9NRY5 505 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 STXBP5LQ9Y2K9 1186 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 SAMM50Q9Y512 469 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 NFASCO94856 1347 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 LTBP3Q9NS15 1303 aa11.08□□□□□ -0.64
TPM3-209ENST00000368527 FAM187AA6NFU0 413 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 GOLGA6L10A6NI86 522 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 TMCO5BA8MYB1 307 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 C19orf81C9J6K1 198 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 CEP104O60308 925 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 ALAS1P13196 640 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 DPEP1P16444 411 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 INPP5BP32019 993 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 HSPA9P38646 679 aaKnown RBP11.07□□□□□ -0.64
TPM3-209ENST00000368527 DMP1Q13316 513 aaPredicted RBP11.07□□□□□ -0.64
TPM3-209ENST00000368527 PGM5Q15124 567 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
TPM3-209ENST00000368527 EPC2Q52LR7 807 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 DALRD3Q5D0E6 543 aaKnown RBP11.07□□□□□ -0.64
TPM3-209ENST00000368527 RNF207Q6ZRF8 634 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 HAUS6Q7Z4H7 955 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 NT5DC3Q86UY8 548 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 BANK1Q8NDB2 785 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 AGBL1Q96MI9 1066 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 RPS6KC1Q96S38 1066 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 RMDN3Q96TC7 470 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 KRT12Q99456 494 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 AGPAT1Q99943 283 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 PDCD2LQ9BRP1 358 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
TPM3-209ENST00000368527 PLVAPQ9BX97 442 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 PACSIN1Q9BY11 444 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 TAOK3Q9H2K8 898 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 EPB41L5Q9HCM4 733 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 PXMP2Q9NR77 195 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 FBXO28Q9NVF7 368 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 HSPBP1Q9NZL4 362 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 PPP2R3BQ9Y5P8 575 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
TPM3-209ENST00000368527 HMGB1P1B2RPK0 211 aaPredicted RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 BHMG1C9JSJ3 638 aaPredicted RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 KRIT1O00522 736 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 NFIBO00712 420 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 RTN2O75298 545 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 MYBL2P10244 700 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 KCNA3P22001 575 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 GARTP22102 1010 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 MXI1P50539 228 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 HNRNPH2P55795 449 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 GPC5P78333 572 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 SKOR1P84550 965 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 GUCY2DQ02846 1103 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 PPATQ06203 517 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 KCNA1Q09470 495 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 DHX34Q14147 1143 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 EZH2Q15910 746 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 GNPTABQ3T906 1256 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 ARHGEF16Q5VV41 709 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 RUFY4Q6ZNE9 571 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 SPATS2Q86XZ4 545 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 MAP4K3Q8IVH8 894 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 NSUN6Q8TEA1 469 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 TRERF1Q96PN7 1200 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 PSMB7Q99436 277 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 MOV10L1Q9BXT6 1211 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 PICK1Q9NRD5 415 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 WRAP73Q9P2S5 460 aaPredicted RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 RASAL2Q9UJF2 1139 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 COQ4Q9Y3A0 265 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 UTP11Q9Y3A2 253 aaKnown RBP11.06□□□□□ -0.64
TPM3-209ENST00000368527 PPME1Q9Y570 386 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 PCDHA10Q9Y5I2 948 aa11.06□□□□□ -0.64
TPM3-209ENST00000368527 AGPSO00116 658 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 PPFIA4O75335 1185 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 ZMYND10O75800 440 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 DGAT1O75907 488 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 PSAPP07602 524 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 VCAM1P19320 739 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 GPC3P51654 580 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 CDR1P51861 262 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 DRG2P55039 364 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms