RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CASP10Q92851 521 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 LPPQ93052 612 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 NLRP4Q96MN2 994 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 NAP1L4Q99733 375 aaKnown RBP17.94■□□□□ 0.46
CKS1B-202ENST00000368436 AGPAT5Q9NUQ2 364 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 COL4A3BPQ9Y5P4 624 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 HCFC2Q9Y5Z7 792 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 TRIOO75962 3097 aa17.94■□□□□ 0.46
CKS1B-202ENST00000368436 TMEM221A6NGB7 291 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 MEIS3P2A8K0S8 358 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 M0R296 226 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 CCNT1O60563 726 aaKnown RBP17.93■□□□□ 0.46
CKS1B-202ENST00000368436 OFD1O75665 1012 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 CTDNEP1O95476 244 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 NOMO2Q5JPE7 1267 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 GLB1LQ6UWU2 654 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 PIK3AP1Q6ZUJ8 805 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 TMEM173Q86WV6 379 aaPredicted RBP17.93■□□□□ 0.46
CKS1B-202ENST00000368436 C4orf19Q8IY42 314 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 SLC7A3Q8WY07 619 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 TMEM169Q96HH4 297 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 CEP170P1Q96L14 293 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 ZBP1Q9H171 429 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 NRDE2Q9H7Z3 1164 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 TBC1D13Q9NVG8 400 aa17.93■□□□□ 0.46
CKS1B-202ENST00000368436 ZC3H11AO75152 810 aaKnown RBP eCLIP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 CXCL14O95715 111 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 GALTP07902 379 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 RFC5P40937 340 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 POLGP54098 1239 aaPredicted RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 NHLH1Q02575 133 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 SPIRE1Q08AE8 756 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 BMS1Q14692 1282 aaKnown RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 LONRF3Q496Y0 759 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 TPRNQ4KMQ1 711 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 EARS2Q5JPH6 523 aaKnown RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 SRGAP1Q7Z6B7 1085 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 MRPL10Q7Z7H8 261 aaKnown RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 DDX53Q86TM3 631 aaKnown RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 PRPF31Q8WWY3 499 aaKnown RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 PSPC1Q8WXF1 523 aaKnown RBP17.92■□□□□ 0.46
CKS1B-202ENST00000368436 PGBD4Q96DM1 585 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 IGSF21Q96ID5 467 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 PCDHB2Q9Y5E7 798 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 IRAK3Q9Y616 596 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 KMT2EQ8IZD2 1858 aa17.92■□□□□ 0.46
CKS1B-202ENST00000368436 DTNBO60941 627 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 CTSAP10619 480 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 YWHABP31946 246 aaKnown RBP17.91■□□□□ 0.46
CKS1B-202ENST00000368436 ANAPC15P60006 121 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 ITIH3Q06033 890 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 SIGLEC14Q08ET2 396 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 LAMTOR4Q0VGL1 99 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 GIT2Q14161 759 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 AGMOQ6ZNB7 445 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 OTUD6AQ7L8S5 288 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 ALYREFQ86V81 257 aaKnown RBP17.91■□□□□ 0.46
CKS1B-202ENST00000368436 SLFN12Q8IYM2 578 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 VPS52Q8N1B4 723 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 WASF1Q92558 559 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 TMEM143Q96AN5 459 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 PBXIP1Q96AQ6 731 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 LXNQ9BS40 222 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 ADAM7Q9H2U9 754 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 MINDY3Q9H8M7 445 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 RGL1Q9NZL6 768 aa17.91■□□□□ 0.46
CKS1B-202ENST00000368436 ORC3Q9UBD5 711 aaPredicted RBP17.91■□□□□ 0.46
CKS1B-202ENST00000368436 ASAP2O43150 1006 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 GAS2O43903 313 aaKnown RBP17.9■□□□□ 0.46
CKS1B-202ENST00000368436 SRGAP2CP0DJJ0 459 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 FDPSP14324 419 aaKnown RBP17.9■□□□□ 0.46
CKS1B-202ENST00000368436 HOXA11P31270 313 aaPredicted RBP17.9■□□□□ 0.46
CKS1B-202ENST00000368436 ANKRD1Q15327 319 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 PTPN21Q16825 1174 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 UBXN11Q5T124 520 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 CES5AQ6NT32 575 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 BCL7CQ8WUZ0 217 aaPredicted RBP17.9■□□□□ 0.46
CKS1B-202ENST00000368436 TCP11Q8WWU5 503 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 TNFRSF25Q93038 417 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 DYDC2Q96IM9 177 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 NECTIN4Q96NY8 510 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 ZSWIM4Q9H7M6 989 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 DNAJB4Q9UDY4 337 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 INPP5FQ9Y2H2 1132 aa17.9■□□□□ 0.46
CKS1B-202ENST00000368436 PIEZO1Q92508 2521 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 FAM205CA6NFA0 338 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 MARCH6O60337 910 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 B4GALT3O60512 393 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 SLITRK3O94933 977 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 BAG4O95429 457 aaKnown RBP17.89■□□□□ 0.45
CKS1B-202ENST00000368436 SLC11A1P49279 550 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 AK2P54819 239 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 RNASELQ05823 741 aaKnown RBP17.89■□□□□ 0.45
CKS1B-202ENST00000368436 NCAPH2Q6IBW4 605 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 FERMT3Q86UX7 667 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 ZNF280BQ86YH2 543 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 SLC22A17Q8WUG5 538 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 AUTS2Q8WXX7 1259 aa17.89■□□□□ 0.45
CKS1B-202ENST00000368436 ASIC4Q96FT7 647 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms