RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 MCMDC2Q4G0Z9 681 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 LARGE2Q8N3Y3 721 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ATXN2LQ8WWM7 1075 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF75CPQ92670 426 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 SRPK1Q96SB4 655 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 EPB41L1Q9H4G0 881 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SAP30BPQ9UHR5 308 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 BAG5Q9UL15 447 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PPP2R2CQ9Y2T4 447 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 MAP3K19Q56UN5 1328 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PDE9AO76083 593 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 GSCP56915 257 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 COBLL1Q53SF7 1204 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 C17orf50Q8WW18 174 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF518BQ9C0D4 1074 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SIAEQ9HAT2 523 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 UBP1Q9NZI7 540 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PFKFB2O60825 505 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 KRT79Q5XKE5 535 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 C8orf58Q8NAV2 365 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 RMDN3Q96TC7 470 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ARHGDIAP52565 204 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 SND1Q7KZF4 910 aaKnown RBP eCLIP4□□□□□ -1.77
SYNE1-207ENST00000367255 LSG1Q9H089 658 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 CACYBPQ9HB71 228 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 GTPBP6O43824 516 aaPredicted RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 TMPOP42166 694 aaKnown RBP4□□□□□ -1.77
SYNE1-207ENST00000367255 MORC3Q14149 939 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 KLHL12Q53G59 568 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 DDHD1Q8NEL9 900 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 AIDAQ96BJ3 306 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PLB1Q6P1J6 1458 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 COG2Q14746 738 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 ATP6V0A1Q93050 837 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 PSMB7Q99436 277 aa4□□□□□ -1.77
SYNE1-207ENST00000367255 FOXO3O43524 673 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 OPHN1O60890 802 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 NSFP46459 744 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TDGQ13569 410 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 EPSTI1Q96J88 318 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 USP16Q9Y5T5 823 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 H3BRJ5 948 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 LGR5O75473 907 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 NR1D1P20393 614 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MXRA7P84157 204 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ATP6V1G3Q96LB4 118 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 KBTBD13C9JR72 458 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RPL5P46777 297 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TBC1D9BQ66K14 1250 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 KCNV2Q8TDN2 545 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 DNAJC9Q8WXX5 260 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RMND5BQ96G75 393 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 BTF3L4Q96K17 158 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 EMC3Q9P0I2 261 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 KLHL33A6NCF5 533 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PPP1R37O75864 691 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ACCSLQ4AC99 568 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MTX3Q5HYI7 312 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 IRGCQ6NXR0 463 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RIPOR2Q9Y4F9 1068 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PER1O15534 1290 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MAPK1P28482 360 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CAVIN4Q5BKX8 364 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PACRGLQ8N7B6 248 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RBM41Q96IZ5 413 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TEKT3Q9BXF9 490 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 KLC4Q9NSK0 619 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SOX30O94993 753 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TNFAIP8O95379 198 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PAEPP09466 180 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SCG2P13521 617 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 POU5F1Q01860 360 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF804AQ7Z570 1209 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 UBE2Q1Q7Z7E8 422 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TTC8Q8TAM2 541 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PAPOLBQ9NRJ5 636 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 GRIN2DO15399 1336 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 HAUS5O94927 633 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PSMD4P55036 377 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RUNDC3AQ59EK9 446 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 VPS39Q96JC1 886 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 JPH4Q96JJ6 628 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TRMOQ9BU70 441 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 UNKQ9C0B0 810 aaKnown RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 RTN3O95197 1032 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 CHEK2O96017 543 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 MYCP01106 439 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PECAM1P16284 738 aaPredicted RBP3.99□□□□□ -1.77
SYNE1-207ENST00000367255 PTK2Q05397 1052 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 WASHC5Q12768 1159 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ZNF569Q5MCW4 686 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 BICRALQ6AI39 1079 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 C16orf89Q6UX73 402 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SCAIQ8N9R8 606 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 SLF1Q9BQI6 1058 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 KCNK9Q9NPC2 374 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 ARHGEF11O15085 1522 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 FAM86C2PA6NEL3 165 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 BTBD11A6QL63 1104 aa3.99□□□□□ -1.77
SYNE1-207ENST00000367255 TTC23LQ6PF05 361 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms