RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
PRKN-205ENST00000366897 KDM4CQ9H3R0 1056 aa14.69□□□□□ -0.06
PRKN-205ENST00000366897 SLC24A3Q9HC58 644 aa14.69□□□□□ -0.06
PRKN-205ENST00000366897 KCNMB3Q9NPA1 279 aa14.69□□□□□ -0.06
PRKN-205ENST00000366897 EIF4E1BA6NMX2 242 aaKnown RBP14.68□□□□□ -0.06
PRKN-205ENST00000366897 A8MUI8 341 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 CALUO43852 315 aaPredicted RBP14.68□□□□□ -0.06
PRKN-205ENST00000366897 SOX5P35711 763 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 ANKS4BQ8N8V4 417 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 BANK1Q8NDB2 785 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 CNOT10Q9H9A5 744 aaKnown RBP14.68□□□□□ -0.06
PRKN-205ENST00000366897 USP40Q9NVE5 1235 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 TGFB1I1O43294 461 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 DNAJC8O75937 253 aaPredicted RBP14.68□□□□□ -0.06
PRKN-205ENST00000366897 UBOX5O94941 541 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 TTLL1O95922 423 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 MMP10P09238 476 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 FERP16591 822 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 PDE6BP35913 854 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 MMP13P45452 471 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 PPATQ06203 517 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 SPIRE1Q08AE8 756 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 ZKSCAN8Q15776 578 aaPredicted RBP14.68□□□□□ -0.06
PRKN-205ENST00000366897 EPM2AIP1Q7L775 607 aaPredicted RBP14.68□□□□□ -0.06
PRKN-205ENST00000366897 FAM186BQ8IYM0 893 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 NLGN1Q8N2Q7 840 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 SLC30A5Q8TAD4 765 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 BTBD6Q96KE9 485 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 ACP6Q9NPH0 428 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 GRHL1Q9NZI5 618 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 NARFQ9UHQ1 456 aa14.68□□□□□ -0.06
PRKN-205ENST00000366897 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 hCG_1984214I3L0E3 225 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 PDXKO00764 312 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 CHMP2AO43633 222 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 TBCAO75347 108 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 SNHG28P0DPA3 235 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 MAPK7Q13164 816 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 CTTNQ14247 550 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 LONRF1Q17RB8 773 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 ZNF713Q8N859 430 aaPredicted RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 DDX23Q9BUQ8 820 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 TYW1Q9NV66 732 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 FGFR1OP2Q9NVK5 253 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 SAMD15Q9P1V8 674 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 DAGLAQ9Y4D2 1042 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 FAM86B1E9PN63 330 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 FAM86B2P0C5J1 330 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 GCFC2P16383 781 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 TNFAIP3P21580 790 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 HOXA13P31271 388 aaPredicted RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 EIF3BP55884 814 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 ARHGAP4P98171 946 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 TRPM8Q7Z2W7 1104 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 PRELID2Q8N945 189 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 ANKRD42Q8N9B4 389 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 NSMCE1Q8WV22 266 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 CTTNBP2NLQ9P2B4 639 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 TRIM33Q9UPN9 1127 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 ALG6Q9Y672 507 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 A0A0A6YYK5 440 aaPredicted RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 EML1O00423 815 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 ACSL3O95573 720 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 SCNN1DP51172 638 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 GTF2IP78347 998 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 MESDQ14696 234 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 ARMC9Q7Z3E5 817 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 TEX2Q8IWB9 1127 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 NLGN2Q8NFZ4 835 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 TACO1Q9BSH4 297 aaKnown RBP14.67□□□□□ -0.06
PRKN-205ENST00000366897 CTNNAL1Q9UBT7 734 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 TRPC6Q9Y210 931 aa14.67□□□□□ -0.06
PRKN-205ENST00000366897 MAST2Q6P0Q8 1798 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 PITPNM2Q9BZ72 1349 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 CCDC169A6NNP5 214 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 FOXN3O00409 490 aaPredicted RBP14.66□□□□□ -0.06
PRKN-205ENST00000366897 GRAPQ13588 217 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 SEPT14Q6ZU15 432 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 PIGWQ7Z7B1 504 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 MYCT1Q8N699 235 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 SYT2Q8N9I0 419 aaPredicted RBP14.66□□□□□ -0.06
PRKN-205ENST00000366897 GDAP1Q8TB36 358 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 GRAPLQ8TC17 118 aaPredicted RBP14.66□□□□□ -0.06
PRKN-205ENST00000366897 DYDC1Q8WWB3 177 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 ELMO3Q96BJ8 720 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 GPR88Q9GZN0 384 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 STK38LQ9Y2H1 464 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 RIMBP2O15034 1052 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 TMEM253P0C7T8 217 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 VCAM1P19320 739 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 NOVP48745 357 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 SPICE1Q8N0Z3 855 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 AGAP11Q8TF27 550 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 PNMA3Q9UL41 463 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 SLC12A4Q9UP95 1085 aa14.66□□□□□ -0.06
PRKN-205ENST00000366897 NEBLO76041 1014 aa14.65□□□□□ -0.06
PRKN-205ENST00000366897 NUDT17P0C025 328 aa14.65□□□□□ -0.06
PRKN-205ENST00000366897 GHRP10912 638 aa14.65□□□□□ -0.06
PRKN-205ENST00000366897 RPL13P26373 211 aaKnown RBP14.65□□□□□ -0.06
PRKN-205ENST00000366897 PTGIRP43119 386 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms