RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 GAREM2Q75VX8 874 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 ADGRE4PQ86SQ3 457 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 ZNF808Q8N4W9 903 aaPredicted RBP6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 PIK3C3Q8NEB9 887 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 EAF2Q96CJ1 260 aaPredicted RBP6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 ING3Q9NXR8 418 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 SLC30A1Q9Y6M5 507 aa6.39□□□□□ -1.39
RNU4-28P-201ENST00000364739 MUSKO15146 869 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 PLSCR1O15162 318 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 EYA4O95677 639 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 GAAP10253 952 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 SELENOPP49908 381 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 TMPRSS15P98073 1019 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 PPARAQ07869 468 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 STAT4Q14765 748 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 PITRM1Q5JRX3 1037 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 KRT40Q6A162 431 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 POLNQ7Z5Q5 900 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 CDYL2Q8N8U2 506 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 TGFBRAP1Q8WUH2 860 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 UIMC1Q96RL1 719 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 PRSS50Q9UI38 385 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 KCNG1Q9UIX4 513 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 SH3BP1Q9Y3L3 701 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 TSC22D4Q9Y3Q8 395 aa6.38□□□□□ -1.39
RNU4-28P-201ENST00000364739 MAFGO15525 162 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 POU3F3P20264 500 aaPredicted RBP6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 KIR2DL3P43628 341 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 LGALS4P56470 323 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 HS1BP3Q53T59 392 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 SPTY2D1Q68D10 685 aaPredicted RBP6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 SGMS1Q86VZ5 419 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 D2HGDHQ8N465 521 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 EXTL1Q92935 676 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 LPPQ93052 612 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 NELFAQ9H3P2 528 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 EVLQ9UI08 416 aaPredicted RBP6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 NUMBLQ9Y6R0 609 aa6.37□□□□□ -1.39
RNU4-28P-201ENST00000364739 SBNO2Q9Y2G9 1366 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 STC2O76061 302 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 FSBPO95073 299 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 LY86O95711 162 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 VSIG10L2P0DP72 767 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 SCAND1P57086 179 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 MGAT5Q09328 741 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 PRKD1Q15139 912 aaPredicted RBP6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 MAMDC4Q6UXC1 1216 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 ZNF662Q6ZS27 426 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 KRT26Q7Z3Y9 468 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 SLC41A1Q8IVJ1 513 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 PPP1R14CQ8TAE6 165 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 COG1Q8WTW3 980 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 OSBPL6Q9BZF3 934 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 IL23AQ9NPF7 189 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 TLR9Q9NR96 1032 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 RCAN3Q9UKA8 241 aa6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.36□□□□□ -1.39
RNU4-28P-201ENST00000364739 GOLGA8AA7E2F4 631 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 ULK1O75385 1050 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 ALDH1A2O94788 518 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 CFBP00751 764 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 AMHP03971 560 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 VIL1P09327 827 aaKnown RBP6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 HIBADHP31937 336 aaKnown RBP6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 SESN3P58005 492 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 IQSEC1Q6DN90 963 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 FAM111BQ6SJ93 734 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 MSL3Q8N5Y2 521 aaKnown RBP6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 CDK5RAP1Q96SZ6 601 aaKnown RBP6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 KCTD10Q9H3F6 313 aa6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 APOBEC2Q9Y235 224 aaKnown RBP6.35□□□□□ -1.39
RNU4-28P-201ENST00000364739 CADPSQ9ULU8 1353 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 PMS2P1A4D2B8 440 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 C1QTNF3-AMACRE9PGA6 284 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 MATN3O15232 486 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 BRINP1O60477 761 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 SEC24DO94855 1032 aaPredicted RBP6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 JUNP05412 331 aaKnown RBP6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 XPAP23025 273 aaPredicted RBP6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 MAN2A1Q16706 1144 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 UGT8Q16880 541 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 USP39Q53GS9 565 aaKnown RBP6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 ATL2Q8NHH9 583 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 WDR66Q8TBY9 1149 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 EDAQ92838 391 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 TCF25Q9BQ70 676 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 C14orf93Q9H972 538 aaKnown RBP6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 TESMINQ9Y4I5 508 aa6.34□□□□□ -1.39
RNU4-28P-201ENST00000364739 CAPN14A8MX76 684 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 PRKD3O94806 890 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 TNFRSF1AP19438 455 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 CASRP41180 1078 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 CDK17Q00537 523 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 UBE3CQ15386 1083 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 FAM214AQ32MH5 1076 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 NRN1LQ496H8 165 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 GAGE13Q4V321 117 aa6.33□□□□□ -1.4
RNU4-28P-201ENST00000364739 LMBR1LQ6UX01 489 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms