RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 URGCPQ8TCY9 931 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 PSPC1Q8WXF1 523 aaKnown RBP9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 SUSD6Q92537 303 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 CASP10Q92851 521 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 LPPQ93052 612 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 PBXIP1Q96AQ6 731 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 CEP170P1Q96L14 293 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 FBXL18Q96ME1 805 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 CEP89Q96ST8 783 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 GBP3Q9H0R5 595 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 S1PR5Q9H228 398 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 KCNMB3Q9NPA1 279 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 CYP26B1Q9NR63 512 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 FAM105AQ9NUU6 356 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
RNU4-59P-201ENST00000364447 C2orf71A6NGG8 1288 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 EML1O00423 815 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 TBX3O15119 743 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 GAS2O43903 313 aaKnown RBP9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 CXCL14O95715 111 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 P4HBP07237 508 aaKnown RBP9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 RFC5P40937 340 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 NPEPPSP55786 919 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 NHLH1Q02575 133 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 ITIH3Q06033 890 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 NCAPH2Q6IBW4 605 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 PPP4R3AQ6IN85 833 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 CES5AQ6NT32 575 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 SYCE2Q6PIF2 218 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 PIK3AP1Q6ZUJ8 805 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 OTUD6AQ7L8S5 288 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 ALYREFQ86V81 257 aaKnown RBP9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 VPS52Q8N1B4 723 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 TCP11Q8WWU5 503 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 WASF1Q92558 559 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 PGBD4Q96DM1 585 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 LXNQ9BS40 222 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 BRMS1Q9HCU9 246 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 TBC1D13Q9NVG8 400 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 VAV3Q9UKW4 847 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 NR2E1Q9Y466 385 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 PPME1Q9Y570 386 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 HCFC2Q9Y5Z7 792 aa9.15□□□□□ -0.94
RNU4-59P-201ENST00000364447 KMT2EQ8IZD2 1858 aa9.15□□□□□ -0.95
RNU4-59P-201ENST00000364447 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 PFKFB2O60825 505 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 CLASP2O75122 1294 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 ERLIN2O94905 339 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 BAG4O95429 457 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 SRGAP2CP0DJJ0 459 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 YWHABP31946 246 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 SIGLEC14Q08ET2 396 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 GIT2Q14161 759 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 ANKRD1Q15327 319 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 EPHA7Q15375 998 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 PTPN21Q16825 1174 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 XKR9Q5GH70 373 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 BMP8AQ7Z5Y6 402 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 SRGAP1Q7Z6B7 1085 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 DDX53Q86TM3 631 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 C4orf19Q8IY42 314 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 SLFN12Q8IYM2 578 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 OXER1Q8TDS5 423 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 PRPF31Q8WWY3 499 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 AUTS2Q8WXX7 1259 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 TMEM143Q96AN5 459 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 IGSF21Q96ID5 467 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 RIPOR3Q96MK2 946 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 CCDC43Q96MW1 224 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 NECTIN4Q96NY8 510 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 ZBP1Q9H171 429 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 DHX33Q9H6R0 707 aaKnown RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 NRDE2Q9H7Z3 1164 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 IFT122Q9HBG6 1241 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 DZANK1Q9NVP4 752 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 ORC3Q9UBD5 711 aaPredicted RBP9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 TPCN1Q9ULQ1 816 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 PCDHB2Q9Y5E7 798 aa9.14□□□□□ -0.95
RNU4-59P-201ENST00000364447 PIEZO1Q92508 2521 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 TDRD15B5MCY1 1934 aaKnown RBP9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 CNTNAP2Q9UHC6 1331 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 MEIS3P2A8K0S8 358 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 ASAP2O43150 1006 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 DTNBO60941 627 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 ZNF623O75123 536 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 OFD1O75665 1012 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 KRT2P35908 639 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 MTHFRP42898 656 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 SLC11A1P49279 550 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 MRE11P49959 708 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 CYP4A11Q02928 519 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 EMC2Q15006 297 aa9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 RARS2Q5T160 578 aaKnown RBP9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 TMEM173Q86WV6 379 aaPredicted RBP9.13□□□□□ -0.95
RNU4-59P-201ENST00000364447 FBXL6Q8N531 539 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms