RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RPS6KC1Q96S38 1066 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 ACO2Q99798 780 aaKnown RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 FDXACB1Q9BRP7 624 aaPredicted RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 SOX7Q9BT81 388 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 C11orf84Q9BUA3 381 aaPredicted RBP4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 OSBPL6Q9BZF3 934 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 MCOLN1Q9GZU1 580 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 GREM2Q9H772 168 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 MAN1C1Q9NR34 630 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 SYNPO2Q9UMS6 1093 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 LIMCH1Q9UPQ0 1083 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 DNM3Q9UQ16 869 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 RIPOR2Q9Y4F9 1068 aa4.81□□□□□ -1.64
RNU6-28P-201ENST00000362378 SCO2A0A1W2PP80 73 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 ANO9A1A5B4 782 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 PLEKHD1A6NEE1 506 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 CCDC154A6NI56 674 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 H3BML4 177 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 DTNBO60941 627 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 KNG1P01042 644 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 JUNBP17275 347 aaPredicted RBP4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 FXR1P51114 621 aaKnown RBP eCLIP4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 USP14P54578 494 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 NCKAP1LP55160 1127 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 NRG3P56975 720 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 ANTXR2P58335 489 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 CCT2P78371 535 aaKnown RBP4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 FOXO4P98177 505 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 PPP3CAQ08209 521 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 SYCP2LQ5T4T6 812 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 PHF19Q5T6S3 580 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 KLHDC10Q6PID8 442 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 MPZL3Q6UWV2 235 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 SRGAP1Q7Z6B7 1085 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 GLB1L2Q8IW92 636 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 GRAMD1CQ8IYS0 662 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 KYQ8NBH2 561 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 LIN37Q96GY3 246 aaPredicted RBP4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 DYDC2Q96IM9 177 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 PSMD1Q99460 953 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 FAM53CQ9NYF3 392 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 FBXO10Q9UK96 956 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 CARMIL2Q6F5E8 1435 aa4.8□□□□□ -1.64
RNU6-28P-201ENST00000362378 A0A0G2JNJ9 132 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 A6NNZ2 444 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 N4BP3O15049 544 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 SEMA7AO75326 666 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 CYP7B1O75881 506 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 TUSC2O75896 110 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZBED1O96006 694 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 COL6A1P12109 1028 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 MEF2AQ02078 507 aaPredicted RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 MGAT2Q10469 447 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 MAN2A1Q16706 1144 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 OVCH2Q7RTZ1 564 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 DENND1CQ8IV53 801 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 MARCH10Q8NA82 808 aaPredicted RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 GLB1L3Q8NCI6 653 aaPredicted RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 NOX5Q96PH1 765 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 ADI1Q9BV57 179 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 TMEM60Q9H2L4 133 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 EPB41L4BQ9H329 900 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 NSUN3Q9H649 340 aaKnown RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 DCP1AQ9NPI6 582 aaPredicted RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 POLR3BQ9NW08 1133 aaPredicted RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 SAE1Q9UBE0 346 aaPredicted RBP4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 Q9UFV3 132 aa4.79□□□□□ -1.64
RNU6-28P-201ENST00000362378 A0A1W2PR48 441 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 H0Y858 1186 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 GSPT1P15170 499 aaKnown RBP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 RHCEP18577 417 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 EPHB3P54753 998 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 RHDQ02161 417 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 EIF4HQ15056 248 aaKnown RBP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 SAFBQ15424 915 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 WDR72Q3MJ13 1102 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 C3orf36Q3SXR2 165 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 COBLL1Q53SF7 1204 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 PRR31Q5SQ13 230 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 GJC2Q5T442 439 aaPredicted RBP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 LMBR1LQ6UX01 489 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 PRR23BQ6ZRT6 265 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 C11orf96Q7Z7L8 435 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 STK32CQ86UX6 486 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 KIAA0319LQ8IZA0 1049 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 GPR156Q8NFN8 814 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 PPP1R35Q8TAP8 253 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 MORC4Q8TE76 937 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 NKD2Q969F2 451 aaPredicted RBP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 HDAC10Q969S8 669 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 ZSWIM3Q96MP5 696 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 FAM204AQ9H8W3 233 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 GCM1Q9NP62 436 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 RBM12Q9NTZ6 932 aaKnown RBP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 USP25Q9UHP3 1055 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 INTUQ9ULD6 942 aa4.78□□□□□ -1.64
RNU6-28P-201ENST00000362378 CFAP20Q9Y6A4 193 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms