RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 TECP42680 631 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 DRG2P55039 364 aaKnown RBP20.58■□□□□ 0.89
CMTM3-201ENST00000361909 JAG1P78504 1218 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 SLFN13Q68D06 897 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 CAPRIN2Q6IMN6 1127 aaKnown RBP20.58■□□□□ 0.89
CMTM3-201ENST00000361909 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 VPS36Q86VN1 386 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 TEPSINQ96N21 525 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 NENFQ9UMX5 172 aa20.58■□□□□ 0.89
CMTM3-201ENST00000361909 O00370 1275 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 TTI1O43156 1089 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 GFPT2O94808 682 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 CAP2P40123 477 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 PTENP60484 403 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 DHX34Q14147 1143 aaKnown RBP20.58■□□□□ 0.88
CMTM3-201ENST00000361909 TBC1D10BQ4KMP7 808 aaPredicted RBP20.58■□□□□ 0.88
CMTM3-201ENST00000361909 EGFL6Q8IUX8 553 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 AGAP11Q8TF27 550 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 PIGSQ96S52 555 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 CPVLQ9H3G5 476 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 ARHGEF10LQ9HCE6 1279 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 GPCPD1Q9NPB8 672 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.58■□□□□ 0.88
CMTM3-201ENST00000361909 HACL1Q9UJ83 578 aa20.58■□□□□ 0.88
CMTM3-201ENST00000361909 ESYT2A0FGR8 921 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 F5H6K3 240 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 TRAF5O00463 557 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 OAS1P00973 400 aaKnown RBP20.57■□□□□ 0.88
CMTM3-201ENST00000361909 EPS15P42566 896 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 KLRC3Q07444 240 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 PDIA5Q14554 519 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 TAOK1Q7L7X3 1001 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 TBC1D1Q86TI0 1168 aaPredicted RBP20.57■□□□□ 0.88
CMTM3-201ENST00000361909 LRRC34Q8IZ02 419 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 MDM1Q8TC05 714 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 ATP8B4Q8TF62 1192 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 HES6Q96HZ4 224 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 PNMA5Q96PV4 448 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 SELENOSQ9BQE4 189 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 GINM1Q9NU53 330 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 NAGPAQ9UK23 515 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 ZBTB21Q9ULJ3 1066 aa20.57■□□□□ 0.88
CMTM3-201ENST00000361909 PNMA6FA0A0J9YX94 578 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 KLHL33A6NCF5 533 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 RGS16O15492 202 aaPredicted RBP20.56■□□□□ 0.88
CMTM3-201ENST00000361909 PMS2P54278 862 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 NCALDP61601 193 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 TMEM119Q4V9L6 283 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 ADGRF4Q8IZF3 695 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 THOC1Q96FV9 657 aaKnown RBP20.56■□□□□ 0.88
CMTM3-201ENST00000361909 VAT1LQ9HCJ6 419 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 SLC5A4Q9NY91 659 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 ATP8A1Q9Y2Q0 1164 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 GALNTL6Q49A17 601 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 DUPD1Q68J44 220 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 MIS18BP1Q6P0N0 1132 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 MIGA2Q7L4E1 593 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 CDAN1Q8IWY9 1227 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 TEX9Q8N6V9 391 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 ADAM7Q9H2U9 754 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 JMJD4Q9H9V9 463 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 ZDHHC18Q9NUE0 388 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 PARP2Q9UGN5 583 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 RASAL2Q9UJF2 1139 aa20.56■□□□□ 0.88
CMTM3-201ENST00000361909 ABLIM1O14639 778 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 PTK2Q05397 1052 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 BLMHQ13867 455 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 AP1ARQ63HQ0 302 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 ALKBH5Q6P6C2 394 aaKnown RBP20.55■□□□□ 0.88
CMTM3-201ENST00000361909 APOBEC3FQ8IUX4 373 aaKnown RBP20.55■□□□□ 0.88
CMTM3-201ENST00000361909 GPIHBP1Q8IV16 184 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 DDX12PQ92771 950 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 MTMR9Q96QG7 549 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 TMX2Q9Y320 296 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 SNX3O60493 162 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 ECM2O94769 699 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-201ENST00000361909 ASNSP08243 561 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 SKIV2L2P42285 1042 aaKnown RBP20.55■□□□□ 0.88
CMTM3-201ENST00000361909 NAPAP54920 295 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 LACTBP83111 547 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-201ENST00000361909 FAM26FQ5R3K3 315 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 PPP1R18Q6NYC8 613 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 KCTD1Q719H9 257 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 DYMQ7RTS9 669 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 IRF2BP2Q7Z5L9 587 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 NT5DC3Q86UY8 548 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 ZNF570Q96NI8 536 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 ERP44Q9BS26 406 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 DEFB129Q9H1M3 183 aa20.55■□□□□ 0.88
CMTM3-201ENST00000361909 USP15Q9Y4E8 981 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-201ENST00000361909 SUN1O94901 812 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 H2AFZP0C0S5 128 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 RARAP10276 462 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 COASYQ13057 564 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 EDRF1Q3B7T1 1238 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 CCDC38Q502W7 563 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 KRT79Q5XKE5 535 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 TTBK2Q6IQ55 1244 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 H2AFVQ71UI9 128 aa20.54■□□□□ 0.88
CMTM3-201ENST00000361909 ELAC2Q9BQ52 826 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms