RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 DNAJC3Q13217 504 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 GRB10Q13322 594 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 TTBK2Q6IQ55 1244 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ISLR2Q6UXK2 745 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 UNC13DQ70J99 1090 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 AMIGO3Q86WK7 504 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 JAMLQ86YT9 394 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 SCYL3Q8IZE3 742 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ABTB1Q969K4 478 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 RNPEPL1Q9HAU8 725 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ASIC3Q9UHC3 531 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 NWD2Q9ULI1 1742 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 A6NHS1 94 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 TAL1P17542 331 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 BTDP43251 543 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 BNIP1Q12981 228 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 POTEGQ6S5H5 508 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 TEX9Q8N6V9 391 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 SLITRK6Q9H5Y7 841 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 CHCHD3Q9NX63 227 aaKnown RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 LMCD1Q9NZU5 365 aa13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
VAMP1-201ENST00000361716 ZNF804BA4D1E1 1349 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 ANKRD33BA6NCL7 494 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 CREB3O43889 395 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 AGTP01019 485 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 CYP2J2P51589 502 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 PRR16Q569H4 304 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 GLYCTKQ8IVS8 523 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 ACTRT1Q8TDG2 376 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 IQCDQ96DY2 449 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 CYTH2Q99418 400 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 NT5C3AQ9H0P0 336 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 MYLK2Q9H1R3 596 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 TAOK3Q9H2K8 898 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 IKZF4Q9H2S9 585 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 ADAM7Q9H2U9 754 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 EMILIN3Q9NT22 766 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 DCTN4Q9UJW0 460 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 NAGPAQ9UK23 515 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 WNK3Q9BYP7 1800 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 LCA5LO95447 670 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 RCAN1P53805 252 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 EXOC3L4Q17RC7 722 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 DPP8Q6V1X1 898 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-201ENST00000361716 EXOC3L1Q86VI1 746 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 KIAA0825Q8IV33 1275 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 MAIP1Q8WWC4 291 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-201ENST00000361716 LRRC37BQ96QE4 947 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 RXFP1Q9HBX9 757 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 TXLNGQ9NUQ3 528 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 GNPATO15228 680 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 ATP9AO75110 1047 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 NOL4O94818 638 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 BAG2O95816 211 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 UBXN2AP68543 259 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 FAM81AQ8TBF8 368 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 STK32AQ8WU08 396 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.64□□□□□ -0.23
VAMP1-201ENST00000361716 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
VAMP1-201ENST00000361716 STMN2Q93045 179 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 NAP1L3Q99457 506 aaPredicted RBP13.64□□□□□ -0.23
VAMP1-201ENST00000361716 POP1Q99575 1024 aaKnown RBP13.64□□□□□ -0.23
VAMP1-201ENST00000361716 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
VAMP1-201ENST00000361716 XRCC5P13010 732 aaKnown RBP13.63□□□□□ -0.23
VAMP1-201ENST00000361716 YY1P25490 414 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 CDK8P49336 464 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 CACNA2D1P54289 1103 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 TCP10Q12799 353 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 CFAP157Q5JU67 520 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 RBM26Q5T8P6 1007 aaKnown RBP13.63□□□□□ -0.23
VAMP1-201ENST00000361716 CYP4F22Q6NT55 531 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 DRAXINQ8NBI3 349 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-201ENST00000361716 PPFIBP2Q8ND30 876 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 SPOCK2Q92563 424 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 KIFAP3Q92845 792 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
VAMP1-201ENST00000361716 HDAC9Q9UKV0 1011 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 COL16A1Q07092 1604 aaPredicted RBP13.63□□□□□ -0.23
VAMP1-201ENST00000361716 ZBTB16Q05516 673 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 RCN1Q15293 331 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 SLC35G1Q2M3R5 365 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 MCUR1Q96AQ8 359 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 RBM41Q96IZ5 413 aaKnown RBP13.63□□□□□ -0.23
VAMP1-201ENST00000361716 C7orf25Q9BPX7 421 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 ARHGEF3Q9NR81 526 aa13.63□□□□□ -0.23
VAMP1-201ENST00000361716 PCMTD2Q9NV79 361 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms