RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 KLK7P49862 253 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 XIAPP98170 497 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 TBL3Q12788 808 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 STRN3Q13033 797 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 ZNF394Q53GI3 561 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 TTI2Q6NXR4 508 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PHKBQ93100 1093 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 NACC2Q96BF6 587 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 RUNDC3BQ96NL0 473 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 NOC4LQ9BVI4 516 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PITPNM3Q9BZ71 974 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 ANKRD2Q9GZV1 360 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 CLIC5Q9NZA1 410 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PARP2Q9UGN5 583 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 DMTF1Q9Y222 760 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 NOC2LQ9Y3T9 749 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 TELO2Q9Y4R8 837 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 GPC6Q9Y625 555 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 CPS1P31327 1500 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 NID2Q14112 1375 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 IQCA1LA6NCM1 817 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 GRM8O00222 908 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 VILLO15195 856 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 MAGEB2O15479 319 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 MAGEB3O15480 346 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 STK10O94804 968 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 RPL5P46777 297 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 TUBA4AP68366 448 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 NSUN2Q08J23 767 aaKnown RBP eCLIP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 SLC29A2Q14542 456 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 CERKLQ49MI3 558 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 MIIPQ5JXC2 388 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 BORAQ6PGQ7 559 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 APOA5Q6Q788 366 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PPP1R21Q6ZMI0 780 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 ARHGAP24Q8N264 748 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 FAM133AQ8N9E0 248 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 ARHGEF2Q92974 986 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PRICKLE1Q96MT3 831 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 SERPINB12Q96P63 405 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PARVBQ9HBI1 364 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 USP29Q9HBJ7 922 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 AMACRQ9UHK6 382 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 PPP1R9AQ9ULJ8 1098 aa12.41□□□□□ -0.42
CNOT4-203ENST00000361528 TTC7AQ9ULT0 858 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-203ENST00000361528 ZBTB43O43298 467 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 TIMM44O43615 452 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 ITGA6P23229 1130 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 STX2P32856 288 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 MTIF2P46199 727 aaKnown RBP12.4□□□□□ -0.42
CNOT4-203ENST00000361528 NEK3P51956 506 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 RNASE9P60153 205 aaKnown RBP12.4□□□□□ -0.42
CNOT4-203ENST00000361528 POU5F1Q01860 360 aaKnown RBP12.4□□□□□ -0.42
CNOT4-203ENST00000361528 GFPT1Q06210 699 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-203ENST00000361528 KLRC3Q07444 240 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 CLUL1Q15846 466 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 NDUFA5Q16718 116 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 C10orf76Q5T2E6 689 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 DUPD1Q68J44 220 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 CYB5R4Q7L1T6 521 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 SATL1Q86VE3 508 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 USP33Q8TEY7 942 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 SUCLG2Q96I99 432 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 DNAJC1Q96KC8 554 aaKnown RBP12.4□□□□□ -0.42
CNOT4-203ENST00000361528 FNBP1Q96RU3 617 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 CCT7Q99832 543 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 CCDC113Q9H0I3 377 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 EMILIN3Q9NT22 766 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 PLK2Q9NYY3 685 aa12.4□□□□□ -0.42
CNOT4-203ENST00000361528 ABCB11O95342 1321 aa12.4□□□□□ -0.43
CNOT4-203ENST00000361528 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 CYTH3O43739 400 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 ZPR1O75312 459 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 MYL6BP14649 208 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 IFNAR1P17181 557 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 IGHMBP2P38935 993 aaKnown RBP12.39□□□□□ -0.43
CNOT4-203ENST00000361528 LRRC14Q15048 493 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 SLC9C1Q4G0N8 1177 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 FAAH2Q6GMR7 532 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 CSGALNACT2Q8N6G5 542 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 ESR2Q92731 530 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 ZFRQ96KR1 1074 aaKnown RBP12.39□□□□□ -0.43
CNOT4-203ENST00000361528 CNOT6LQ96LI5 555 aaKnown RBP12.39□□□□□ -0.43
CNOT4-203ENST00000361528 BTBD10Q9BSF8 475 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 HGH1Q9BTY7 390 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 STK33Q9BYT3 514 aa12.39□□□□□ -0.43
CNOT4-203ENST00000361528 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms