RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 JAK3P52333 1124 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 NONOQ15233 471 aaKnown RBP eCLIP15.6■□□□□ 0.09
VPS29-201ENST00000360579 PTPN14Q15678 1187 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 ELMSAN1Q6PJG2 1045 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 DHX32Q7L7V1 743 aaKnown RBP15.6■□□□□ 0.09
VPS29-201ENST00000360579 SIX5Q8N196 739 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 BICD2Q8TD16 824 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 RIT2Q99578 217 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 NRDE2Q9H7Z3 1164 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 DPP7Q9UHL4 492 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 BRPF3Q9ULD4 1205 aa15.6■□□□□ 0.09
VPS29-201ENST00000360579 MYH9P35579 1960 aaKnown RBP15.59■□□□□ 0.09
VPS29-201ENST00000360579 KLF18A0A0U1RQI7 1052 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 PI15O43692 258 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 ZNF623O75123 536 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 CLCN4P51793 760 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 EXOSC10Q01780 885 aaKnown RBP15.59■□□□□ 0.09
VPS29-201ENST00000360579 LETM2Q2VYF4 491 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 ZNF410Q86VK4 478 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 RDM1Q8NG50 284 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 URGCPQ8TCY9 931 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 STAMQ92783 540 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 PGBD4Q96DM1 585 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 FAM105AQ9NUU6 356 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 WNT16Q9UBV4 365 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 PIN4Q9Y237 131 aaKnown RBP15.59■□□□□ 0.09
VPS29-201ENST00000360579 INPP5FQ9Y2H2 1132 aa15.59■□□□□ 0.09
VPS29-201ENST00000360579 GAS7O60861 476 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 CSDE1O75534 798 aaKnown RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 OFD1O75665 1012 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 LMNAP02545 664 aaKnown RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 RFX1P22670 979 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 CDC27P30260 824 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 TARBP2Q15633 366 aaKnown RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 CMASQ8NFW8 434 aaPredicted RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 KCNG4Q8TDN1 519 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 BCL7CQ8WUZ0 217 aaPredicted RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 LPPQ93052 612 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 LENG9Q96B70 501 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 KLHL5Q96PQ7 755 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 NIFKQ9BYG3 293 aaKnown RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 MRPL17Q9NRX2 175 aaKnown RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 FAM217BQ9NTX9 383 aaPredicted RBP15.58■□□□□ 0.08
VPS29-201ENST00000360579 SSX2IPQ9Y2D8 614 aa15.58■□□□□ 0.08
VPS29-201ENST00000360579 DNAH14Q0VDD8 3507 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 A0A087WZ62 844 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 STK25O00506 426 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 MSH4O15457 936 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 CHMP2AO43633 222 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 SLC11A1P49279 550 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 KRT32Q14532 448 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 XKR3Q5GH77 459 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 CATSPER4Q7RTX7 472 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 CCDC148Q8NFR7 591 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 NXPE3Q969Y0 559 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 FAM193BQ96PV7 902 aaPredicted RBP15.57■□□□□ 0.08
VPS29-201ENST00000360579 JPH2Q9BR39 696 aaPredicted RBP15.57■□□□□ 0.08
VPS29-201ENST00000360579 FDXACB1Q9BRP7 624 aaPredicted RBP15.57■□□□□ 0.08
VPS29-201ENST00000360579 TMEM175Q9BSA9 504 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 TEKT3Q9BXF9 490 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 RHOBTB2Q9BYZ6 727 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 GBP3Q9H0R5 595 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 KANSL3Q9P2N6 904 aa15.57■□□□□ 0.08
VPS29-201ENST00000360579 SEPT9Q9UHD8 586 aaPredicted RBP15.57■□□□□ 0.08
VPS29-201ENST00000360579 NAP1L2Q9ULW6 460 aaPredicted RBP15.57■□□□□ 0.08
VPS29-201ENST00000360579 IGKV6-21A0A0C4DH24 114 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 ALDH2P05091 517 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 HMGB1P09429 215 aaKnown RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 CNPP09543 421 aaKnown RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 ADD1P35611 737 aaKnown RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 USP11P51784 963 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 FGD1P98174 961 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 AKAP17AQ02040 695 aaKnown RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 DRP2Q13474 957 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 UGCGQ16739 394 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 LONRF3Q496Y0 759 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 MTERF2Q49AM1 385 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 LRCH2Q5VUJ6 765 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 ZC3H14Q6PJT7 736 aaKnown RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 SLC5A5Q92911 643 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 CCDC136Q96JN2 1154 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 TCEANC2Q96MN5 208 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 VN1R3Q9BXE9 311 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 SUCLA2Q9P2R7 463 aaPredicted RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 DNAJB4Q9UDY4 337 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 CNTNAP2Q9UHC6 1331 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 DENND4AQ7Z401 1863 aa15.56■□□□□ 0.08
VPS29-201ENST00000360579 EP300Q09472 2414 aaPredicted RBP15.56■□□□□ 0.08
VPS29-201ENST00000360579 PRPF3O43395 683 aaKnown RBP15.55■□□□□ 0.08
VPS29-201ENST00000360579 LILRB3O75022 631 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 SSBP05455 408 aaKnown RBP eCLIP15.55■□□□□ 0.08
VPS29-201ENST00000360579 URODP06132 367 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 ADH1AP07327 375 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 GBP2P32456 591 aaPredicted RBP15.55■□□□□ 0.08
VPS29-201ENST00000360579 TSGA10IPQ3SY00 556 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 MIER3Q7Z3K6 550 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 RHPN2Q8IUC4 686 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 UNC45AQ9H3U1 944 aa15.55■□□□□ 0.08
VPS29-201ENST00000360579 WDR6Q9NNW5 1121 aaKnown RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms