RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 IDEP14735 1019 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 SYKP43405 635 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 EFNA5P52803 228 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 NAALADL2Q58DX5 795 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 TWF2Q6IBS0 349 aaKnown RBP21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 LRRC15Q8TF66 581 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 CCDC34Q96HJ3 373 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 MAGEF1Q9HAY2 307 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 C1orf112Q9NSG2 853 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 DACT1Q9NYF0 836 aa21.16■□□□□ 0.98
HLA-DRB1-201ENST00000360004 PLS3P13797 630 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 DEFB103AP81534 67 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 PCBP1Q15365 356 aaKnown RBP eCLIP21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 MAPK6Q16659 721 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 ARSHQ5FYA8 562 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 PHOSPHO2Q8TCD6 241 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 DDX12PQ92771 950 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 STAMQ92783 540 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 KIFC3Q9BVG8 833 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 TNMDQ9H2S6 317 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 MINDY3Q9H8M7 445 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 PARVGQ9HBI0 331 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 PRMT7Q9NVM4 692 aaPredicted RBP21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 MSRAQ9UJ68 235 aa21.15■□□□□ 0.98
HLA-DRB1-201ENST00000360004 PHLPP2Q6ZVD8 1323 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 H0YCG3 227 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 ENPP3O14638 875 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 PRKCBP05771 671 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 STAG3L1P0CL83 205 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 NPTX2P47972 431 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 MBTD1Q05BQ5 628 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 GIT2Q14161 759 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 HABP4Q5JVS0 413 aaKnown RBP21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RASIP1Q5U651 963 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RNF169Q8NCN4 708 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 NFKBIZQ9BYH8 718 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TSPYL2Q9H2G4 693 aaPredicted RBP21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TMX1Q9H3N1 280 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 CHST12Q9NRB3 414 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 USP25Q9UHP3 1055 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TET1Q8NFU7 2136 aa21.14■□□□□ 0.97
HLA-DRB1-201ENST00000360004 MYMKA6NI61 221 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 K7ERI5 159 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SLC16A4O15374 487 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 AFMP43652 599 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 ASIC1P78348 528 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 STRN3Q13033 797 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 MAPK7Q13164 816 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 E2F4Q16254 413 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 LRIT3Q3SXY7 679 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 CDCA2Q69YH5 1023 aaPredicted RBP21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 IFNLR1Q8IU57 520 aaPredicted RBP21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 HERC6Q8IVU3 1022 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 DAW1Q8N136 415 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 AGPAT5Q9NUQ2 364 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 PCDHB7Q9Y5E2 793 aa21.13■□□□□ 0.97
HLA-DRB1-201ENST00000360004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 GRXCR1A8MXD5 290 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 K7ENM7 598 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TLL1O43897 1013 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 MGEA5O60502 916 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 AXLP30530 894 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 NDUFA8P51970 172 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 PRPF4BQ13523 1007 aaKnown RBP21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RAB30Q15771 203 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 NOTUMQ6P988 496 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SLC24A5Q71RS6 500 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 FAM178BQ8IXR5 827 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 CCDC65Q8IXS2 484 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TRIM6Q9C030 488 aaPredicted RBP21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RGS18Q9NS28 235 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TCHHQ07283 1943 aa21.12■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TRAK2O60296 914 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TSPAN1O60635 241 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SLFN14P0C7P3 912 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SKIP12755 728 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 GAP43P17677 238 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SARSP49591 514 aaKnown RBP21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RABGGTBP53611 331 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 TMCO2Q7Z6W1 182 aaPredicted RBP21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 NPAS4Q8IUM7 802 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 CNNM3Q8NE01 707 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SPIRE2Q8WWL2 714 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 LINC01599Q8WXQ3 324 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 CPB2Q96IY4 423 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 PRIMPOLQ96LW4 560 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 GBP4Q96PP9 640 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 YME1L1Q96TA2 773 aa21.11■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RAB27AP51159 221 aa21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SMAD3P84022 425 aaKnown RBP21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 FAM109BQ6ICB4 259 aaPredicted RBP21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 APBB1IPQ7Z5R6 666 aaPredicted RBP21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 RTN4RL1Q86UN2 441 aaPredicted RBP21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 SLC17A8Q8NDX2 589 aa21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 BICD1Q96G01 975 aa21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 ADPGKQ9BRR6 497 aa21.1■□□□□ 0.97
HLA-DRB1-201ENST00000360004 GOLPH3LQ9H4A5 285 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms