RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PPIP5K2O43314 1243 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 BCRP11274 1271 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 COPB2P35606 906 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 PTENP60484 403 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 DLG4P78352 724 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 PPARDQ03181 441 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 KIF22Q14807 665 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 PADI6Q6TGC4 694 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 RUFY4Q6ZNE9 571 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 LDHDQ86WU2 507 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 SLC9A9Q8IVB4 645 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 ARFGAP2Q8N6H7 521 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 RAB17Q9H0T7 212 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 VCPKMTQ9H867 229 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 TTC7AQ9ULT0 858 aaPredicted RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 COG5Q9UP83 839 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 EMSYQ7Z589 1322 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 SPDYE2BA6NHP3 402 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 KIAA0754O94854 1291 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 ERLIN2O94905 339 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 SPDYE6P0CI01 402 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 SEC24CP53992 1094 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 DHX9Q08211 1270 aaKnown RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 GRIPAP1Q4V328 841 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 B3GNT9Q6UX72 402 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 INTS8Q75QN2 995 aaKnown RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 MIER3Q7Z3K6 550 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 BBXQ8WY36 941 aaPredicted RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 SEC14L1Q92503 715 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 NAP1L3Q99457 506 aaPredicted RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 FMO2Q99518 471 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 UBE2TQ9NPD8 197 aaPredicted RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 TMOD4Q9NZQ9 345 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 DIS3Q9Y2L1 958 aaKnown RBP9.3□□□□□ -0.92
RFX3-202ENST00000358730 DAAM1Q9Y4D1 1078 aa9.3□□□□□ -0.92
RFX3-202ENST00000358730 VGLL3A8MV65 326 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 E7EVH7 732 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 TULP1O00294 542 aaPredicted RBP9.29□□□□□ -0.92
RFX3-202ENST00000358730 CPP00450 1065 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 INPP5BP32019 993 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 DR1Q01658 176 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 POU5F1Q01860 360 aaKnown RBP9.29□□□□□ -0.92
RFX3-202ENST00000358730 CETN1Q12798 172 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 BIRC3Q13489 604 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ODF2Q5BJF6 829 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 FAM160B2Q86V87 743 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ARHGEF19Q8IW93 802 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 RHOT2Q8IXI1 618 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 FLAD1Q8NFF5 587 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 NEK9Q8TD19 979 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ATP8B4Q8TF62 1192 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ZNF473Q8WTR7 871 aaKnown RBP9.29□□□□□ -0.92
RFX3-202ENST00000358730 ALG3Q92685 438 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 RIT2Q99578 217 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 AGPAT1Q99943 283 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 MXRA8Q9BRK3 442 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 STRA6Q9BX79 667 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ERVK-5Q9HDB9 667 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 CTTNBP2NLQ9P2B4 639 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 LARSQ9P2J5 1176 aaKnown RBP9.29□□□□□ -0.92
RFX3-202ENST00000358730 TMEM110-MUSTN1A8MSY1 372 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ITGB5P18084 799 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 GCLMP48507 274 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 VAMP7P51809 220 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 KRT71Q3SY84 523 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 ZNF746Q6NUN9 644 aaPredicted RBP9.29□□□□□ -0.92
RFX3-202ENST00000358730 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 LMO3Q8TAP4 145 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 MYCBPAPQ8TBZ2 947 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 CBWD1Q9BRT8 395 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 VEZTQ9HBM0 779 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 PPANQ9NQ55 473 aaKnown RBP9.29□□□□□ -0.92
RFX3-202ENST00000358730 ATP8A1Q9Y2Q0 1164 aa9.29□□□□□ -0.92
RFX3-202ENST00000358730 SYNGAP1Q96PV0 1343 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 ATXN2Q99700 1313 aaKnown RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 USP8P40818 1118 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 PPP3CAQ08209 521 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 IFFO1Q0D2I5 559 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 MYBPC2Q14324 1141 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 TBC1D10BQ4KMP7 808 aaPredicted RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 CDAN1Q8IWY9 1227 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 FAM151AQ8WW52 585 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 CNKSR1Q969H4 720 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 CCT8L2Q96SF2 557 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 GLIS2Q9BZE0 524 aaPredicted RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 TMEM206Q9H813 350 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.28□□□□□ -0.922e-6■■■■■ 96.1
RFX3-202ENST00000358730 KCNH7Q9NS40 1196 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 CCPG1Q9ULG6 757 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 PSME4Q14997 1843 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 FAM107AO95990 144 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 APBA3O96018 575 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 FTLP02792 175 aaPredicted RBP9.28□□□□□ -0.92
RFX3-202ENST00000358730 HSPA1LP34931 641 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 ALCAMQ13740 583 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 TNIP1Q15025 636 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 PPP2R5EQ16537 467 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 MICALCLQ6ZW33 695 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 MIGA2Q7L4E1 593 aa9.28□□□□□ -0.92
RFX3-202ENST00000358730 SPATS2Q86XZ4 545 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms