RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FBXO47Q5MNV8 452 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 NT5DC1Q5TFE4 455 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 ZNF710Q8N1W2 664 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 TMEM161BQ8NDZ6 487 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 NFKBIZQ9BYH8 718 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 GCOM2Q9BZD3 368 aaPredicted RBP16.4■□□□□ 0.22
CCNE1-202ENST00000357943 EXOC1Q9NV70 894 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 KIAA1468Q9P260 1216 aa16.4■□□□□ 0.22
CCNE1-202ENST00000357943 TNRC18O15417 2968 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-202ENST00000357943 K7ENM7 598 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 RHOBTB3O94955 611 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 SMC2O95347 1197 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 GHRP10912 638 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 SYN1P17600 705 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 FGFR4P22455 802 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 STK4Q13043 487 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 KCNB1Q14721 858 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 ZC2HC1CQ53FD0 456 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-202ENST00000357943 FAM26FQ5R3K3 315 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 ISM2Q6H9L7 571 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 ZNF720Q7Z2F6 126 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 IFNLR1Q8IU57 520 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-202ENST00000357943 GSDMAQ96QA5 445 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 PRKAG2Q9UGJ0 569 aa16.39■□□□□ 0.21
CCNE1-202ENST00000357943 NOC2LQ9Y3T9 749 aaKnown RBP16.39■□□□□ 0.21
CCNE1-202ENST00000357943 RANBP2P49792 3224 aaKnown RBP16.38■□□□□ 0.21
CCNE1-202ENST00000357943 DENND3A2RUS2 1198 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 INO80B-WBP1J3KQ70 363 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 NBNO60934 754 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 MYBP10242 640 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 MBTD1Q05BQ5 628 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 LPIN1Q14693 890 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
CCNE1-202ENST00000357943 TAS1R3Q7RTX0 852 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 HAUS6Q7Z4H7 955 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 SRGAP1Q7Z6B7 1085 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 FAM228AQ86W67 206 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 ZBTB8OSQ8IWT0 167 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 KIAA0895Q8NCT3 520 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 INO80BQ9C086 356 aaPredicted RBP16.38■□□□□ 0.21
CCNE1-202ENST00000357943 C2orf40Q9H1Z8 148 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 AGO3Q9H9G7 860 aaKnown RBP16.38■□□□□ 0.21
CCNE1-202ENST00000357943 KCNG1Q9UIX4 513 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 MAN1B1Q9UKM7 699 aa16.38■□□□□ 0.21
CCNE1-202ENST00000357943 ZMYND8Q9ULU4 1186 aaPredicted RBP16.38■□□□□ 0.21
CCNE1-202ENST00000357943 BIN1O00499 593 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 GCNT3O95395 438 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 EDN1P05305 212 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 MAPTP10636 758 aaKnown RBP16.37■□□□□ 0.21
CCNE1-202ENST00000357943 STRA6Q9BX79 667 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 CCDC113Q9H0I3 377 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 USP20Q9Y2K6 914 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 GDAQ9Y2T3 454 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 MYH11P35749 1972 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 SIP14410 1827 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 K7ERI5 159 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 RPS6KA5O75582 802 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 PPP1R37O75864 691 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 GTF2BQ00403 316 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 KCNA1Q09470 495 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 PSMD2Q13200 908 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 RBM43Q6ZSC3 357 aaKnown RBP16.37■□□□□ 0.21
CCNE1-202ENST00000357943 TSHZ1Q6ZSZ6 1077 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 SMYD4Q8IYR2 804 aaPredicted RBP16.37■□□□□ 0.21
CCNE1-202ENST00000357943 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
CCNE1-202ENST00000357943 FZD8Q9H461 694 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 ST6GALNAC4Q9H4F1 302 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 RMND1Q9NWS8 449 aa16.37■□□□□ 0.21
CCNE1-202ENST00000357943 PHLPP2Q6ZVD8 1323 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 CSF2RAP15509 400 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 BMP6P22004 513 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 CD52P31358 61 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 EFNA5P52803 228 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 NFX1Q12986 1120 aaKnown RBP16.36■□□□□ 0.21
CCNE1-202ENST00000357943 MAPK6Q16659 721 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 AMHR2Q16671 573 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 DEFB128Q7Z7B8 93 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 SLC17A8Q8NDX2 589 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 KCNN1Q92952 543 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 SYAP1Q96A49 352 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-202ENST00000357943 VWCEQ96DN2 955 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 PADI3Q9ULW8 664 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 TBX20Q9UMR3 447 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 ST3GAL5Q9UNP4 418 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 SQORQ9Y6N5 450 aa16.36■□□□□ 0.21
CCNE1-202ENST00000357943 LAMA3Q16787 3333 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 H0YCG3 227 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 B4GALT5O43286 388 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 PRPF6O94906 941 aaKnown RBP16.35■□□□□ 0.21
CCNE1-202ENST00000357943 PRKCBP05771 671 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
CCNE1-202ENST00000357943 RGS19P49795 217 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 PAK2Q13177 524 aa16.35■□□□□ 0.21
CCNE1-202ENST00000357943 ZNF658Q5TYW1 1059 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms