RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 USP17L6PQ6QN14 398 aa25.58■■□□□ 1.69
NPAS3-203ENST00000357798 CLEC10AQ8IUN9 316 aa25.58■■□□□ 1.69
NPAS3-203ENST00000357798 GRAPLQ8TC17 118 aaPredicted RBP25.58■■□□□ 1.69
NPAS3-203ENST00000357798 OLFML3Q9NRN5 406 aa25.58■■□□□ 1.69
NPAS3-203ENST00000357798 TMOD4Q9NZQ9 345 aa25.58■■□□□ 1.69
NPAS3-203ENST00000357798 TGFB1I1O43294 461 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 IFNAR2P48551 515 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 TCEAL1Q15170 157 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 NOP53Q9NZM5 478 aaKnown RBP25.57■■□□□ 1.68
NPAS3-203ENST00000357798 RTCBQ9Y3I0 505 aaKnown RBP25.57■■□□□ 1.68
NPAS3-203ENST00000357798 ALG6Q9Y672 507 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 RSPH10B2B2RC85 870 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 EIF3DO15371 548 aaKnown RBP eCLIP25.57■■□□□ 1.68
NPAS3-203ENST00000357798 RSPH10BP0C881 870 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 GAP43P17677 238 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 BARGINQ6ZT62 677 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 TRIM6Q9C030 488 aaPredicted RBP25.57■■□□□ 1.68
NPAS3-203ENST00000357798 TAOK3Q9H2K8 898 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 CD209Q9NNX6 404 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 PFASO15067 1338 aa25.57■■□□□ 1.68
NPAS3-203ENST00000357798 CCDC189A1A4V9 331 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 ANP32DO95626 131 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 SLC16A2P36021 539 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 AGAP11Q8TF27 550 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 SRP68Q9UHB9 627 aaKnown RBP25.56■■□□□ 1.68
NPAS3-203ENST00000357798 PAX7P23759 505 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 AP3B2Q13367 1082 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 KIF22Q14807 665 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 ECT2Q9H8V3 914 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 TAS2R14Q9NYV8 317 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 ZMYM2Q9UBW7 1377 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 FGFR4P22455 802 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 SF3A3Q12874 501 aaKnown RBP eCLIP25.56■■□□□ 1.68
NPAS3-203ENST00000357798 UBAP2Q5T6F2 1119 aaKnown RBP25.56■■□□□ 1.68
NPAS3-203ENST00000357798 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 TBC1D22AQ8WUA7 517 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 CRYGNQ8WXF5 182 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 ART4Q93070 314 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 ZSWIM1Q9BR11 485 aa25.56■■□□□ 1.68
NPAS3-203ENST00000357798 SUN1O94901 812 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 Q4G0T1 1027 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 TTC27Q6P3X3 843 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 CYFIP1Q7L576 1253 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 GPR101Q96P66 508 aaPredicted RBP25.55■■□□□ 1.68
NPAS3-203ENST00000357798 PLCD4Q9BRC7 762 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 INTS2Q9H0H0 1204 aaKnown RBP25.55■■□□□ 1.68
NPAS3-203ENST00000357798 SLCO1A2P46721 670 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 HSPA2P54652 639 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 KCNJ2P63252 427 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 KCNA1Q09470 495 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 NFIXQ14938 502 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 CYP1B1Q16678 543 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 CCDC137Q6PK04 289 aaKnown RBP25.55■■□□□ 1.68
NPAS3-203ENST00000357798 EXOC3L1Q86VI1 746 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 RUSC1Q9BVN2 902 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 APEX2Q9UBZ4 518 aa25.55■■□□□ 1.68
NPAS3-203ENST00000357798 IL1R1P14778 569 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 ALDH5A1P51649 535 aaPredicted RBP25.54■■□□□ 1.68
NPAS3-203ENST00000357798 ARHGAP4P98171 946 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 BNIP1Q12981 228 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 SEL1L2Q5TEA6 688 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 AADACL2Q6P093 401 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 UHMK1Q8TAS1 419 aaKnown RBP25.54■■□□□ 1.68
NPAS3-203ENST00000357798 TBC1D16Q8TBP0 767 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 FAM212AQ96EL1 285 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 O00370 1275 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 CCND1P24385 295 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 TRMT10CQ7L0Y3 403 aaKnown RBP25.54■■□□□ 1.68
NPAS3-203ENST00000357798 RPS6KC1Q96S38 1066 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 CCDC113Q9H0I3 377 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 CD2APQ9Y5K6 639 aa25.54■■□□□ 1.68
NPAS3-203ENST00000357798 GREB1LQ9C091 1923 aaPredicted RBP25.54■■□□□ 1.68
NPAS3-203ENST00000357798 TULP1O00294 542 aaPredicted RBP25.53■■□□□ 1.68
NPAS3-203ENST00000357798 EYA4O95677 639 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 SLC15A2Q16348 729 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 DYDC1Q8WWB3 177 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 SEPT11Q9NVA2 429 aaKnown RBP25.53■■□□□ 1.68
NPAS3-203ENST00000357798 L3MBTL1Q9Y468 752 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 RFX1P22670 979 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 COPS2P61201 443 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 CTTNQ14247 550 aaKnown RBP25.53■■□□□ 1.68
NPAS3-203ENST00000357798 QRICH1Q2TAL8 776 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 PRR16Q569H4 304 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 KCTD1Q719H9 257 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 SMIM5Q71RC9 77 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 KRT35Q92764 455 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 AGPAT1Q99943 283 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 BHMT2Q9H2M3 363 aa25.53■■□□□ 1.68
NPAS3-203ENST00000357798 DBR1Q9UK59 544 aaKnown RBP25.53■■□□□ 1.68
NPAS3-203ENST00000357798 IGF2BP3O00425 579 aaKnown RBP eCLIP25.52■■□□□ 1.68
NPAS3-203ENST00000357798 KCNQ2O43526 872 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 ZNF568Q3ZCX4 644 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 PALB2Q86YC2 1186 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 KCTD17Q8N5Z5 321 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 THOC1Q96FV9 657 aaKnown RBP25.52■■□□□ 1.68
NPAS3-203ENST00000357798 IFT74Q96LB3 600 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 FAM20AQ96MK3 541 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 PASKQ96RG2 1323 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 ZDHHC14Q8IZN3 488 aa25.52■■□□□ 1.68
NPAS3-203ENST00000357798 MORC4Q8TE76 937 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms