RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ZNF658Q5TYW1 1059 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 MIER2Q8N344 545 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SMARCAL1Q9NZC9 954 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 ZNF185O15231 689 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 MGEA5O60502 916 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 FGFR1P11362 822 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 ITGB6P18564 788 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 CATSPER3Q86XQ3 398 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 WDR11Q9BZH6 1224 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PCDHB7Q9Y5E2 793 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 ESYT3A0FGR9 886 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PARNO95453 639 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 CCL23P55773 120 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 NPEPPSP55786 919 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 FAM102AQ5T9C2 384 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 TMC2Q8TDI7 906 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 CLMNQ96JQ2 1002 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 ASXL1Q8IXJ9 1541 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 CSF1RP07333 972 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SULT1E1P49888 294 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PRAMEP78395 509 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 QRICH1Q2TAL8 776 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 GLE1Q53GS7 698 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 TTC1Q99614 292 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 GLT8D2Q9H1C3 349 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 THPOP40225 353 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 CASP4P49662 377 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 LZICQ8WZA0 190 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SENP6Q9GZR1 1112 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 TRIM17Q9Y577 477 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PQBP1O60828 265 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 MZF1P28698 734 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 BEST2Q8NFU1 509 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 GRK7Q8WTQ7 553 aa7.85□□□□□ -1.15
VPS13A-202ENST00000357409 SRPK1Q96SB4 655 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 EIF2AK1Q9BQI3 630 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 RBAKQ9NYW8 714 aaPredicted RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PPIEQ9UNP9 301 aaKnown RBP7.85□□□□□ -1.15
VPS13A-202ENST00000357409 PITPNM2Q9BZ72 1349 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 AVPR1AP37288 418 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TTC23LQ6PF05 361 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 EXOC8Q8IYI6 725 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 MAIP1Q8WWC4 291 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 PPP1R13BQ96KQ4 1090 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 AIPL1Q9NZN9 384 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 SART1O43290 800 aaKnown RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 PALMO75781 387 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 LLGL2Q6P1M3 1020 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TMEM179Q6ZVK1 233 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 WDR75Q8IWA0 830 aaKnown RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 ZNF512Q96ME7 567 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 KLF6Q99612 283 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 POLR3FQ9H1D9 316 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 UNC45AQ9H3U1 944 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 ZFYVE28Q9HCC9 887 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 CASTOR2A6NHX0 329 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 NCF1BA6NI72 391 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 NCF1CA8MVU1 366 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 NCF1P14598 390 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 FUT11Q495W5 492 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TRIM58Q8NG06 486 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 SH3TC2Q8TF17 1288 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 KIF28PB7ZC32 967 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 RBM6P78332 1123 aaKnown RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 PTK2BQ14289 1009 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TOMM20Q15388 145 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 RASGRP2Q7LDG7 609 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 GCOM2Q9BZD3 368 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TMEM206Q9H813 350 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 IL1RL2Q9HB29 575 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TJP2Q9UDY2 1190 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 PNMA6FA0A0J9YX94 578 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 E2F6O75461 281 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 AKT1P31749 480 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 TWF1Q12792 350 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 PRMT6Q96LA8 375 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 KCNH4Q9UQ05 1017 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 MED7O43513 233 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 STAT5BP51692 787 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 WDR72Q3MJ13 1102 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 FAM84BQ96KN1 310 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 YME1L1Q96TA2 773 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 ZFYVE1Q9HBF4 777 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 PRR36Q9H6K5 1346 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 HSPA4LO95757 839 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 VAMP7P51809 220 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 ACAP3Q96P50 834 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 GLIS2Q9BZE0 524 aaPredicted RBP7.84□□□□□ -1.15
VPS13A-202ENST00000357409 SENP2Q9HC62 589 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 ENTPD7Q9NQZ7 604 aa7.84□□□□□ -1.15
VPS13A-202ENST00000357409 FTLP02792 175 aaPredicted RBP7.84□□□□□ -1.16
VPS13A-202ENST00000357409 MB21D1Q8N884 522 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 LINC00116Q8NCU8 138 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 FBXO18Q8NFZ0 1043 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 P3H4Q92791 437 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 MAP4K1Q92918 833 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 PGBD4Q96DM1 585 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 DEFB129Q9H1M3 183 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 FAN1Q9Y2M0 1017 aa7.84□□□□□ -1.16
VPS13A-202ENST00000357409 SH2B2O14492 632 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms