RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 GGT7Q9UJ14 662 aa16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.67■□□□□ 0.26
TRAPPC11-202ENST00000357207 KRT3P12035 628 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 CA8P35219 290 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 DDX42Q86XP3 938 aaKnown RBP eCLIP16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 MCUQ8NE86 351 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 CNKSR1Q969H4 720 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 CCDC68Q9H2F9 335 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 LRRIQ3A6PVS8 624 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 WDR64B1ANS9 1081 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 GOLGA8MH3BSY2 632 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 TFDP2Q14188 446 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 NAB2Q15742 525 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 PTGISQ16647 500 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 TMCO4Q5TGY1 634 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 SLFN12LQ6IEE8 588 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 DCLK2Q8N568 766 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 FAF2Q96CS3 445 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 PRMT1Q99873 361 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 OSBPL1AQ9BXW6 950 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 CD209Q9NNX6 404 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 BATF3Q9NR55 127 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 CSF1RP07333 972 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 STAT4Q14765 748 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 IZUMO3Q5VZ72 239 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 RSRC2Q7L4I2 434 aaKnown RBP16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 HACE1Q8IYU2 909 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 COA1Q9GZY4 146 aa16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 USP15Q9Y4E8 981 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC11-202ENST00000357207 EIF4E1BA6NMX2 242 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 GH2P01242 217 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 GPS1Q13098 491 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 PRPSAP1Q14558 356 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 HP1BP3Q5SSJ5 553 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 MIS18BP1Q6P0N0 1132 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 RHOT1Q8IXI2 618 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 USP38Q8NB14 1042 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 AGPAT1Q99943 283 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 MSTO1Q9BUK6 570 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 ISCUQ9H1K1 167 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 NGRNQ9NPE2 291 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 USP21Q9UK80 565 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 APOBEC2Q9Y235 224 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 MYO3AQ8NEV4 1616 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 CFAP69A5D8W1 941 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 H3BQF6 201 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 TLR3O15455 904 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 KLK7P49862 253 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 C1orf146Q5VVC0 180 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 KRT39Q6A163 491 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 PASD1Q8IV76 773 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 DEPDC1BQ8WUY9 529 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 DRC3Q9H069 523 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 EMSYQ7Z589 1322 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 DIAPH2O60879 1101 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 CDH16O75309 829 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 SURF1Q15526 300 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 ADGRF4Q8IZF3 695 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 ABTB1Q969K4 478 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 NSUN4Q96CB9 384 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 SENP1Q9P0U3 644 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 NOD1Q9Y239 953 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 LDHAP00338 332 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 CD44P16070 742 aaKnown RBP16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 IGBP1P78318 339 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 KRT17Q04695 432 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 ITKQ08881 620 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 TMEM270Q6UE05 265 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 SCARA5Q6ZMJ2 495 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 C7orf31Q8N865 590 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 NACA2Q9H009 215 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 KLC2Q9H0B6 622 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 KIAA1586Q9HCI6 787 aa16.65■□□□□ 0.26
TRAPPC11-202ENST00000357207 PDIA2Q13087 525 aaKnown RBP16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 PDXDC2PQ6P474 469 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 ZBTB33Q86T24 672 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRIML2Q8N7C3 387 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 SLC35G2Q8TBE7 412 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 KAZALD1Q96I82 304 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 TTC1Q99614 292 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 SLC16A4O15374 487 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 PSAPP07602 524 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 SPOPLQ6IQ16 392 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 ZBED8Q8IZ13 594 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 FAM161BQ96MY7 647 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 STK33Q9BYT3 514 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRMT10CQ7L0Y3 403 aaKnown RBP16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 TRPM8Q7Z2W7 1104 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 MCPH1Q8NEM0 835 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 ATL2Q8NHH9 583 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 BAG5Q9UL15 447 aa16.64■□□□□ 0.25
TRAPPC11-202ENST00000357207 EDRF1Q3B7T1 1238 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 PPM1NQ8N819 430 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 MAP3K14Q99558 947 aa16.63■□□□□ 0.25
TRAPPC11-202ENST00000357207 DMGDHQ9UI17 866 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms