RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FNDC3AQ9Y2H6 1198 aaKnown RBP15.8■□□□□ 0.12
CHD4-201ENST00000357008 SYCE1LA8MT33 242 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 SERPINB2P05120 415 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 ZNF394Q53GI3 561 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 EXT2Q93063 718 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 HEY1Q9Y5J3 304 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 DIAPH2O60879 1101 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 RASGRP2Q7LDG7 609 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 PASD1Q8IV76 773 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 ZNF473Q8WTR7 871 aaKnown RBP15.8■□□□□ 0.12
CHD4-201ENST00000357008 DONSONQ9NYP3 566 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 GTSE1Q9NYZ3 720 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 KIF28PB7ZC32 967 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 TBXAS1P24557 533 aaPredicted RBP15.8■□□□□ 0.12
CHD4-201ENST00000357008 GRM4Q14833 912 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 KIF2CQ99661 725 aa15.8■□□□□ 0.12
CHD4-201ENST00000357008 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 POTECB2RU33 542 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 NCAPHQ15003 741 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 IZUMO3Q5VZ72 239 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 ABI1Q8IZP0 508 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 DCPSQ96C86 337 aaKnown RBP15.79■□□□□ 0.12
CHD4-201ENST00000357008 CCT8L2Q96SF2 557 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 ATP6V0A4Q9HBG4 840 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 BARHL2Q9NY43 387 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 DDX56Q9NY93 547 aaKnown RBP15.79■□□□□ 0.12
CHD4-201ENST00000357008 MAGI3Q5TCQ9 1506 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 OR6B3Q8NGW1 331 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 RNPC3Q96LT9 517 aaKnown RBP15.79■□□□□ 0.12
CHD4-201ENST00000357008 DBNDD1Q9H9R9 158 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 ITIH6Q6UXX5 1313 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 CLDN3O15551 220 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 GLYCTKQ8IVS8 523 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 NCLNQ969V3 563 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 BATF3Q9NR55 127 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 UBE4BO95155 1302 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 H3BRJ5 948 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 CYP2D6P10635 497 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 ZBTB41Q5SVQ8 909 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 CCNI2Q6ZMN8 369 aaPredicted RBP15.79■□□□□ 0.12
CHD4-201ENST00000357008 ENOSF1Q7L5Y1 443 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 SH3RF3Q8TEJ3 882 aaPredicted RBP15.79■□□□□ 0.12
CHD4-201ENST00000357008 IRX2Q9BZI1 471 aaPredicted RBP15.79■□□□□ 0.12
CHD4-201ENST00000357008 WWP1Q9H0M0 922 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 INPP5FQ9Y2H2 1132 aa15.79■□□□□ 0.12
CHD4-201ENST00000357008 F8W8V4 182 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 TRIM72Q6ZMU5 477 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 FRMD5Q7Z6J6 570 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 THNSL1Q8IYQ7 743 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 SLC26A7Q8TE54 656 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 CCDC195A0A1B0GUA6 201 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 ASAP2O43150 1006 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 MAN1A2O60476 641 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 GRAPQ13588 217 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 EFTUD2Q15029 972 aaKnown RBP eCLIP15.78■□□□□ 0.128e-7■■■■■ 32.2
CHD4-201ENST00000357008 RARS2Q5T160 578 aaKnown RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 GRAPLQ8TC17 118 aaPredicted RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 ADA2Q9NZK5 511 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 FBXO2Q9UK22 296 aaPredicted RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 ANKARQ7Z5J8 1434 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 SERPINB4P48594 390 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 ZNF746Q6NUN9 644 aaPredicted RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
CHD4-201ENST00000357008 NLRP4Q96MN2 994 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 TBC1D22BQ9NU19 505 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 BCS1LQ9Y276 419 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 NCAPD2Q15021 1401 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 TCP11X1B4DZS4 312 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 ZNF699Q32M78 642 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 CDC26Q8NHZ8 85 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
CHD4-201ENST00000357008 PSD3Q9NYI0 1048 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 PP2D1A8MPX8 630 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 SNAP25P60880 206 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 MTMR1Q13613 665 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 CCNYL1Q8N7R7 359 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 ANXA13P27216 316 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 EAPPQ56P03 285 aaPredicted RBP15.77■□□□□ 0.12
CHD4-201ENST00000357008 KIAA1755Q5JYT7 1200 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 RWDD4Q6NW29 188 aaKnown RBP15.77■□□□□ 0.12
CHD4-201ENST00000357008 SYDE1Q6ZW31 735 aaPredicted RBP15.77■□□□□ 0.12
CHD4-201ENST00000357008 SH3GL3Q99963 347 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 FAM213AQ9BRX8 229 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 COA1Q9GZY4 146 aa15.77■□□□□ 0.12
CHD4-201ENST00000357008 USP17L15C9J2P7 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L13C9JLJ4 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L11C9JVI0 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L18D6R9N7 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L22D6RA61 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L17D6RBQ6 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L19D6RCP7 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 USP17L20D6RJB6 530 aa15.77■□□□□ 0.11
CHD4-201ENST00000357008 ZSCAN20P17040 1043 aaPredicted RBP15.77■□□□□ 0.11
CHD4-201ENST00000357008 OSBPP22059 807 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms