RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
TRIM13-201ENST00000356017 UNC13DQ70J99 1090 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 DEFB128Q7Z7B8 93 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 GRAMD1CQ8IYS0 662 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 SEPT8Q92599 483 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 BLZF1Q9H2G9 400 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 OLFML3Q9NRN5 406 aa17.15■□□□□ 0.34
TRIM13-201ENST00000356017 NOC2LQ9Y3T9 749 aaKnown RBP17.15■□□□□ 0.34
TRIM13-201ENST00000356017 H0YGN5 161 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 MBD3O95983 291 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 MAPTP10636 758 aaKnown RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 MDM2Q00987 491 aaPredicted RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 NCBP1Q09161 790 aaKnown RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 PLEKHG4Q58EX7 1191 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 PADI3Q9ULW8 664 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 ST3GAL5Q9UNP4 418 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 K7ERI5 159 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 ACTN1P12814 892 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 CD52P31358 61 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 NCKAP1LP55160 1127 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 DPYDQ12882 1025 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 NFX1Q12986 1120 aaKnown RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 MAPK6Q16659 721 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 CNKSR3Q6P9H4 555 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 PSRC1Q6PGN9 363 aaPredicted RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 KCNN1Q92952 543 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 PRIMPOLQ96LW4 560 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 FTHL17Q9BXU8 183 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 TMEM134Q9H6X4 195 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 PRMT7Q9NVM4 692 aaPredicted RBP17.14■□□□□ 0.33
TRIM13-201ENST00000356017 ARHGAP28Q9P2N2 729 aa17.14■□□□□ 0.33
TRIM13-201ENST00000356017 SLC16A4O15374 487 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 CSDE1O75534 798 aaKnown RBP17.13■□□□□ 0.33
TRIM13-201ENST00000356017 ERLIN2O94905 339 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 SMC2O95347 1197 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 CASP1P29466 404 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
TRIM13-201ENST00000356017 MBTD1Q05BQ5 628 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 COASYQ13057 564 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 FAM187BQ17R55 369 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 CATSPER4Q7RTX7 472 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 HAUS6Q7Z4H7 955 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 FAM228AQ86W67 206 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 SFR1Q86XK3 245 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 TMEM161BQ8NDZ6 487 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 DBF4BQ8NFT6 615 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 KIFC3Q9BVG8 833 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 ST6GALNAC4Q9H4F1 302 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 MINDY3Q9H8M7 445 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 MRPL44Q9H9J2 332 aaKnown RBP17.13■□□□□ 0.33
TRIM13-201ENST00000356017 ERVK-5Q9HDB9 667 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 CHST12Q9NRB3 414 aa17.13■□□□□ 0.33
TRIM13-201ENST00000356017 TANC1Q9C0D5 1861 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 K7ENM7 598 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 EFCAB14O75071 495 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 FGBP02675 491 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 AXLP30530 894 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 PSMD2Q13200 908 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 IKBKEQ14164 716 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 STXBP4Q6ZWJ1 553 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 ZNF720Q7Z2F6 126 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 OSBPL7Q9BZF2 842 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 FZD8Q9H461 694 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 EXOC1Q9NV70 894 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 ADGRA3Q8IWK6 1321 aa17.12■□□□□ 0.33
TRIM13-201ENST00000356017 ABHD14A-ACY1A0A1B0GW23 586 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 DENND3A2RUS2 1198 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 BAIAP3O94812 1187 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 RPN1P04843 607 aaKnown RBP17.11■□□□□ 0.33
TRIM13-201ENST00000356017 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
TRIM13-201ENST00000356017 STRN3Q13033 797 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 ALCAMQ13740 583 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 PPP4R3CPQ6ZMV5 832 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 GSDMAQ96QA5 445 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 FIZ1Q96SL8 496 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 RMND1Q9NWS8 449 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 PCDHB13Q9Y5F0 798 aa17.11■□□□□ 0.33
TRIM13-201ENST00000356017 ACKR2O00590 384 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 KLRC4O43908 158 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 PRKCBP05771 671 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 PRR29P0C7W0 189 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 ACRP10323 421 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 GTF2BQ00403 316 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 EHHADHQ08426 723 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 PNOCQ13519 176 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 KCNB1Q14721 858 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 KMT5BQ4FZB7 885 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 FAM26FQ5R3K3 315 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 GPT2Q8TD30 523 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 HVCN1Q96D96 273 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 VWCEQ96DN2 955 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 GDF15Q99988 308 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
TRIM13-201ENST00000356017 AGPAT5Q9NUQ2 364 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 LTBP2Q14767 1821 aa17.1■□□□□ 0.33
TRIM13-201ENST00000356017 FGFR4P22455 802 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms