RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 MAN1A1P33908 653 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 ARL1P40616 181 aaPredicted RBP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 MDH1P40925 334 aaKnown RBP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 MDM2Q00987 491 aaPredicted RBP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 SLC18A3Q16572 532 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 CCDC38Q502W7 563 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 GPC2Q8N158 579 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 HVCN1Q96D96 273 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 FAM217BQ9NTX9 383 aaPredicted RBP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 DIS3Q9Y2L1 958 aaKnown RBP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PPP1R37O75864 691 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 ZRANB2O95218 330 aaKnown RBP eCLIP13.22□□□□□ -0.29
COLCA1-201ENST00000355430 ACTN1P12814 892 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PHBP35232 272 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 BFSP1Q12934 665 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PKN1Q16512 942 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 RHOT2Q8IXI1 618 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 NDC80O14777 642 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PTK2Q05397 1052 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 ITIH3Q06033 890 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 SURF1Q15526 300 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PRAMEF18Q5VWM3 479 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 ELMOD1Q8N336 334 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 SPATA33Q96N06 139 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 SSU72P8A0A1W2PR75 194 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 OATP04181 439 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 RARBP10826 455 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 OR6J1Q8NGC5 347 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 INTS13Q9NVM9 706 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 WDR64B1ANS9 1081 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 MXI1P50539 228 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 SEC23AQ15436 765 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 ARHGAP24Q8N264 748 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 TMEM206Q9H813 350 aa13.22□□□□□ -0.29
COLCA1-201ENST00000355430 PHKA2P46019 1235 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 CORO7P57737 925 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 DRAP1Q14919 205 aaPredicted RBP13.21□□□□□ -0.29
COLCA1-201ENST00000355430 ARHGEF18Q6ZSZ5 1173 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 ERO1BQ86YB8 467 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 RPUSD2Q8IZ73 545 aaKnown RBP13.21□□□□□ -0.29
COLCA1-201ENST00000355430 NLRP4Q96MN2 994 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 CHUKO15111 745 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
COLCA1-201ENST00000355430 RAD51CO43502 376 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 ARPP19P56211 112 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 NUGGCQ68CJ6 796 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 ADGRA1Q86SQ6 560 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 GLYCTKQ8IVS8 523 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 ERGIC2Q96RQ1 377 aa13.21□□□□□ -0.29
COLCA1-201ENST00000355430 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.3
COLCA1-201ENST00000355430 ANXA13P27216 316 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 MYO1EQ12965 1108 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 MXD3Q9BW11 206 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 LACRTQ9GZZ8 138 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 FLT1P17948 1338 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 POLRMTO00411 1230 aaKnown RBP13.21□□□□□ -0.3
COLCA1-201ENST00000355430 BMP6P22004 513 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 SFNP31947 248 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 RGS2P41220 211 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 PDIA5Q14554 519 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 PAPD7Q5XG87 772 aaKnown RBP13.21□□□□□ -0.3
COLCA1-201ENST00000355430 USP50Q70EL3 339 aaPredicted RBP13.21□□□□□ -0.3
COLCA1-201ENST00000355430 VCXQ9H320 206 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 PCDHB4Q9Y5E5 795 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 CAPN6Q9Y6Q1 641 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 SYNGAP1Q96PV0 1343 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 TCHHQ07283 1943 aa13.21□□□□□ -0.3
COLCA1-201ENST00000355430 STK25O00506 426 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 PMS1P54277 932 aaKnown RBP13.2□□□□□ -0.3
COLCA1-201ENST00000355430 ARHGAP4P98171 946 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 GABPAQ06546 454 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 RILPQ96NA2 401 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 CCT8L2Q96SF2 557 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 MAD2L2Q9UI95 211 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 PODXLO00592 558 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 STAM2O75886 525 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 AKR1B1P15121 316 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 PEX19P40855 299 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 RWDD2BP57060 319 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 FBXO33Q7Z6M2 555 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 CCDC110Q8TBZ0 833 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 TMEM39BQ9GZU3 492 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 ZNF302Q9NR11 478 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 MANSC4A6NHS7 340 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-201ENST00000355430 SGK1O00141 431 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 SART1O43290 800 aaKnown RBP13.2□□□□□ -0.3
COLCA1-201ENST00000355430 SRGAP2CP0DJJ0 459 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 FGFR2P21802 821 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 GCLCP48506 637 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-201ENST00000355430 INTS2Q9H0H0 1204 aaKnown RBP13.2□□□□□ -0.3
COLCA1-201ENST00000355430 ALCAMQ13740 583 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 TTBK2Q6IQ55 1244 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms