RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 COA1Q9GZY4 146 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 TAF1DQ9H5J8 278 aaPredicted RBP10.12□□□□□ -0.79
SMG6-202ENST00000354901 ECT2Q9H8V3 914 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 LUC7LQ9NQ29 371 aaKnown RBP10.12□□□□□ -0.79
SMG6-202ENST00000354901 CDK5RAP2Q96SN8 1893 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 ZBTB39O15060 712 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 RNF8O76064 485 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 SHBGP04278 402 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 ABCD1P33897 745 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 PPP2R2AP63151 447 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 ATP11AP98196 1134 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 SLC18A3Q16572 532 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 MFN1Q8IWA4 741 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 LMNTD2Q8IXW0 634 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 SP8Q8IXZ3 490 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 IQCKQ8N0W5 287 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 FAM81AQ8TBF8 368 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 CCT6BQ92526 530 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 TAF4BQ92750 862 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 NAF1Q96HR8 494 aaKnown RBP10.12□□□□□ -0.79
SMG6-202ENST00000354901 AP1M1Q9BXS5 423 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 DPH5Q9H2P9 285 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 KCTD10Q9H3F6 313 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 SLC5A4Q9NY91 659 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 PNMA2Q9UL42 364 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 ZNF232Q9UNY5 417 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 DNM3Q9UQ16 869 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 CEP104O60308 925 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 LCA5LO95447 670 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 FESP07332 822 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 CRKP46108 304 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 NOVP48745 357 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 BLMHQ13867 455 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 BYSLQ13895 437 aaKnown RBP10.12□□□□□ -0.79
SMG6-202ENST00000354901 PLS1Q14651 629 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 GLE1Q53GS7 698 aaKnown RBP10.12□□□□□ -0.79
SMG6-202ENST00000354901 SWAP70Q9UH65 585 aa10.12□□□□□ -0.79
SMG6-202ENST00000354901 ANKRD31Q8N7Z5 1873 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 FAM86B1E9PN63 330 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 MEIS2O14770 477 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 PJA2O43164 708 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 FAM86B2P0C5J1 330 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 ALDH1B1P30837 517 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 SLCO1A2P46721 670 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 ERFP50548 548 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 CTTNQ14247 550 aaKnown RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 LRRC14Q15048 493 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 EXOC3L4Q17RC7 722 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 SEPT14Q6ZU15 432 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 GORASP1Q9BQQ3 440 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.11□□□□□ -0.795e-7■■■■■ 110.8
SMG6-202ENST00000354901 SEPT11Q9NVA2 429 aaKnown RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 PCDHA2Q9Y5H9 948 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 GOLGA6L10A0A0M3HER8 536 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 GRID2IPA4D2P6 1211 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 F5H6K3 240 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 HIP1RO75146 1068 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 PPFIA2O75334 1257 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 AKAP3O75969 853 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 MMEP08473 750 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 XRCC5P13010 732 aaKnown RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 NPR1P16066 1061 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 HSD17B3P37058 310 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 RAD23BP54727 409 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 KLRC3Q07444 240 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 NAB2Q15742 525 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 MIGA2Q7L4E1 593 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 ZNF571Q7Z3V5 609 aaPredicted RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 RDH13Q8NBN7 331 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 MAGEC3Q8TD91 643 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 CHMP6Q96FZ7 201 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 CEP63Q96MT8 703 aa10.11□□□□□ -0.79
SMG6-202ENST00000354901 DDX23Q9BUQ8 820 aaKnown RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 MMADHCQ9H3L0 296 aaPredicted RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 ATF5Q9Y2D1 282 aaPredicted RBP10.11□□□□□ -0.79
SMG6-202ENST00000354901 TBCAO75347 108 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 DNAJC8O75937 253 aaPredicted RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 LUC7L3O95232 432 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 ABCB11O95342 1321 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 KRT16P08779 473 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 UCHL3P15374 230 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 SLC12A3P55017 1021 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 TMEM62Q0P6H9 643 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 GIT2Q14161 759 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 ZYXQ15942 572 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 ADAT2Q7Z6V5 191 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 TPH2Q8IWU9 490 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 LRRC34Q8IZ02 419 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 FBF1Q8TES7 1133 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 RUSC1Q9BVN2 902 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 UBE2OQ9C0C9 1292 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 PKD2L1Q9P0L9 805 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 FBXL5Q9UKA1 691 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 SUGT1Q9Y2Z0 365 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 GFPT2O94808 682 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 CFBP00751 764 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 NQO1P15559 274 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 PRLRP16471 622 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms