RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 LACRTQ9GZZ8 138 aa11.7□□□□□ -0.54
SND1-201ENST00000354725 PAIP2BQ9ULR5 123 aaKnown RBP11.7□□□□□ -0.54
SND1-201ENST00000354725 PITPNM2Q9BZ72 1349 aa11.7□□□□□ -0.54
SND1-201ENST00000354725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 DNM1LO00429 736 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 VIMP08670 466 aaKnown RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 EHHADHQ08426 723 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 CLPPQ16740 277 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 CREG2Q8IUH2 290 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 ZNF473Q8WTR7 871 aaKnown RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 PCDH18Q9HCL0 1135 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 NOP53Q9NZM5 478 aaKnown RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 PRELID1Q9Y255 219 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 SAR1BQ9Y6B6 198 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 RBP3P10745 1247 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 MCM3P25205 808 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 MCM7P33993 719 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 ELF3P78545 371 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 PDCLQ13371 301 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 ASTE1Q2TB18 679 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 UNC5DQ6UXZ4 953 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 NANOGNBQ7Z5D8 188 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 CCHCR1Q8TD31 782 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 AK8Q96MA6 479 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 FAM167BQ9BTA0 163 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 SIK3Q9Y2K2 1263 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 DAGLAQ9Y4D2 1042 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 PABPN1LA6NDY0 278 aaKnown RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 CRKP46108 304 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 TCEAL1Q15170 157 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 CCSAPQ6IQ19 270 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 SAMD7Q7Z3H4 446 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 SLC15A3Q8IY34 581 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 ZFPM2Q8WW38 1151 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 PRMT6Q96LA8 375 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 OXCT2Q9BYC2 517 aaPredicted RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 AGPAT5Q9NUQ2 364 aa11.69□□□□□ -0.54
SND1-201ENST00000354725 LUC7L2Q9Y383 392 aaKnown RBP11.69□□□□□ -0.54
SND1-201ENST00000354725 SPDYE5A6NIY4 337 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 NKRFO15226 690 aaKnown RBP eCLIP11.68□□□□□ -0.542e-6■■■□□ 15.3
SND1-201ENST00000354725 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 ZFXP17010 805 aaPredicted RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 KRT83P78385 493 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 CCNI2Q6ZMN8 369 aaPredicted RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 SEPT14Q6ZU15 432 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 TMCO1Q9UM00 188 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 PLAGL2Q9UPG8 496 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 hCG_1984214I3L0E3 225 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 PJA2O43164 708 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 CCNE1P24864 410 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 PSMC4P43686 418 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 BPIFB4P59827 614 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 NCCRP1Q6ZVX7 275 aaPredicted RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 ZMYND12Q9H0C1 365 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 EPN3Q9H201 632 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 NHEJ1Q9H9Q4 299 aaPredicted RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 ZNHIT6Q9NWK9 470 aaKnown RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 IQCA1LA6NCM1 817 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 RBAK-RBAKDNI3L0D1 243 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
SND1-201ENST00000354725 DIAPH2O60879 1101 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 STAT6P42226 847 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 NLRP5P59047 1200 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 PHEXP78562 749 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 BIRC3Q13489 604 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 C12orf60Q5U649 245 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 CENPPQ6IPU0 288 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 TEX9Q8N6V9 391 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 BHMTQ93088 406 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 IWS1Q96ST2 819 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 SPO11Q9Y5K1 396 aa11.68□□□□□ -0.54
SND1-201ENST00000354725 CEP350Q5VT06 3117 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 RASA4BC9J798 803 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 EDIL3O43854 480 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 S100BP04271 92 aaPredicted RBP11.67□□□□□ -0.54
SND1-201ENST00000354725 HOXA7P31268 230 aaPredicted RBP11.67□□□□□ -0.54
SND1-201ENST00000354725 PPP1R2P41236 205 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 RCN1Q15293 331 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 ANKRD20A8PQ5CZ79 823 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 EMC10Q5UCC4 262 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 PCNTO95613 3336 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 NDUFB5O43674 189 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 KATNA1O75449 491 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
SND1-201ENST00000354725 KIF5BP33176 963 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 VAV2P52735 878 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 POLE2P56282 527 aa11.67□□□□□ -0.54
SND1-201ENST00000354725 CKAP4Q07065 602 aaKnown RBP11.67□□□□□ -0.54
SND1-201ENST00000354725 TAF1CQ15572 869 aaPredicted RBP11.67□□□□□ -0.54
SND1-201ENST00000354725 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms