RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 LEXMQ3ZCV2 418 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 NAALADL2Q58DX5 795 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 TWF2Q6IBS0 349 aaKnown RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 PTCRAQ6ISU1 281 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 ZNF410Q86VK4 478 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 LRRC43Q8N309 656 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 MICAL1Q8TDZ2 1067 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 TNFRSF25Q93038 417 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 INO80BQ9C086 356 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 WRAP73Q9P2S5 460 aaPredicted RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 HCSTQ9UBK5 93 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 PIN4Q9Y237 131 aaKnown RBP12.83□□□□□ -0.36
CDRT1-202ENST00000354433 CLIC4Q9Y696 253 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 LOXHD1Q8IVV2 1947 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 EVPLQ92817 2033 aa12.83□□□□□ -0.36
CDRT1-202ENST00000354433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.82□□□□□ -0.36
CDRT1-202ENST00000354433 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 STBD1O95210 358 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 IL9P15248 144 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 LIG1P18858 919 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 ME1P48163 572 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 XKR9Q5GH70 373 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 OTUD6AQ7L8S5 288 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 CATSPER4Q7RTX7 472 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 TPH2Q8IWU9 490 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 NUP62CLQ9H1M0 184 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 TYW1Q9NV66 732 aaKnown RBP12.82□□□□□ -0.36
CDRT1-202ENST00000354433 PCDHA7Q9UN72 937 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 PCDHA12Q9UN75 941 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
CDRT1-202ENST00000354433 NCK2O43639 380 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 LAG3P18627 525 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 IRS1P35568 1242 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TXKP42681 527 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 NDUFV1P49821 464 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 PTPAQ15257 358 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 CLUL1Q15846 466 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 CCDC73Q6ZRK6 1079 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 RBM43Q6ZSC3 357 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 ECHDC2Q86YB7 292 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 C4orf19Q8IY42 314 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 EXOC8Q8IYI6 725 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 SPPL3Q8TCT6 385 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 NEK9Q8TD19 979 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 PSPC1Q8WXF1 523 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TMEM143Q96AN5 459 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TSPY26PQ9H489 355 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 CLSTN2Q9H4D0 955 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TTC12Q9H892 705 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TCF20Q9UGU0 1960 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 FGF18O76093 207 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 BMP15O95972 392 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 DNAJB1P25685 340 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 SSTR3P32745 418 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 MCM7P33993 719 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 GTF2F1P35269 517 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 RFC5P40937 340 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 FAM189BP81408 668 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 SPIRE1Q08AE8 756 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 HYAL1Q12794 435 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 EMC2Q15006 297 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 PUS10Q3MIT2 529 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 RBM23Q86U06 439 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 COLGALT1Q8NBJ5 622 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 HELQQ8TDG4 1101 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 MRPS27Q92552 414 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 MTRQ99707 1265 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 EIF2AK1Q9BQI3 630 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 TLR9Q9NR96 1032 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 NOL7Q9UMY1 257 aaKnown RBP12.81□□□□□ -0.36
CDRT1-202ENST00000354433 PPME1Q9Y570 386 aa12.81□□□□□ -0.36
CDRT1-202ENST00000354433 A0A0U1RQF3 1178 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 FAM237AA0A1B0GTK4 181 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 POTEMA6NI47 508 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 WNT7AO00755 349 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 CMA1P23946 247 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 PBX3P40426 434 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-202ENST00000354433 UBE3AQ05086 875 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 CAMK1Q14012 370 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 LONRF3Q496Y0 759 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 ADGRD2Q7Z7M1 963 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 ENGASEQ8NFI3 743 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 TCP11Q8WWU5 503 aa12.8□□□□□ -0.36
CDRT1-202ENST00000354433 CASD1Q96PB1 797 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms