RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RDH13Q8NBN7 331 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 C1orf131Q8NDD1 294 aaKnown RBP23.99■■□□□ 1.43
UPF3A-201ENST00000351487 CAMKK2Q96RR4 588 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 AP1M1Q9BXS5 423 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 DIS3Q9Y2L1 958 aaKnown RBP23.99■■□□□ 1.43
UPF3A-201ENST00000351487 ANKRD62A6NC57 917 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 KRIT1O00522 736 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 TNFAIP3P21580 790 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 GUCY2FP51841 1108 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 MCCD1P59942 119 aaPredicted RBP23.99■■□□□ 1.43
UPF3A-201ENST00000351487 CETN1Q12798 172 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 SPP2Q13103 211 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 ARHGAP44Q17R89 818 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 MAEAQ7L5Y9 396 aa23.99■■□□□ 1.43
UPF3A-201ENST00000351487 PARP14Q460N5 1801 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 ZNF233A6NK53 670 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 FOXN3O00409 490 aaPredicted RBP23.98■■□□□ 1.43
UPF3A-201ENST00000351487 PMM2O15305 246 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 ALAS1P13196 640 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 YWHABP31946 246 aaKnown RBP23.98■■□□□ 1.43
UPF3A-201ENST00000351487 HADHBP55084 474 aaKnown RBP23.98■■□□□ 1.43
UPF3A-201ENST00000351487 PPP3CAQ08209 521 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 SRLQ86TD4 932 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 C4orf19Q8IY42 314 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 XXYLT1Q8NBI6 393 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 CBWD1Q9BRT8 395 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 USP20Q9Y2K6 914 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 SAMM50Q9Y512 469 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 ASTN2O75129 1339 aaPredicted RBP23.98■■□□□ 1.43
UPF3A-201ENST00000351487 DDX3YO15523 660 aaKnown RBP23.98■■□□□ 1.43
UPF3A-201ENST00000351487 IRAK1P51617 712 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 C1orf220Q5T0J3 134 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 AGPAT1Q99943 283 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 CAPS2Q9BXY5 557 aa23.98■■□□□ 1.43
UPF3A-201ENST00000351487 DDX47Q9H0S4 455 aaKnown RBP23.98■■□□□ 1.43
UPF3A-201ENST00000351487 A6NNZ2 444 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 TISP43B9A030 160 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 KRT14P02533 472 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 ABCB4P21439 1286 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 CXCL9Q07325 125 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 TUBB8Q3ZCM7 444 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 HAUS6Q7Z4H7 955 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 PALB2Q86YC2 1186 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 CPXCR1Q8N123 301 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 ARHGEF26Q96DR7 871 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 PCIF1Q9H4Z3 704 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 GINM1Q9NU53 330 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 TAS2R14Q9NYV8 317 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 HSPBP1Q9NZL4 362 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 PPP1R9AQ9ULJ8 1098 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 WDR81Q562E7 1941 aa23.97■■□□□ 1.43
UPF3A-201ENST00000351487 GRIN2DO15399 1336 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 LRRN2O75325 713 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 RXRBP28702 533 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 NCKAP1LP55160 1127 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 PGM5Q15124 567 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 TCEAL1Q15170 157 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 SEC14L1Q92503 715 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 IWS1Q96ST2 819 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 THAP2Q9H0W7 228 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 CARD9Q9H257 536 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 RAVER2Q9HCJ3 691 aaKnown RBP23.96■■□□□ 1.43
UPF3A-201ENST00000351487 DPEP1P16444 411 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 HLTFQ14527 1009 aaKnown RBP eCLIP23.96■■□□□ 1.43
UPF3A-201ENST00000351487 RHOT2Q8IXI1 618 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 SLC17A8Q8NDX2 589 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 MYOZ2Q9NPC6 264 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 UBE2TQ9NPD8 197 aaPredicted RBP23.96■■□□□ 1.43
UPF3A-201ENST00000351487 PNMA2Q9UL42 364 aa23.96■■□□□ 1.43
UPF3A-201ENST00000351487 ITGA4P13612 1032 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 JAK3P52333 1124 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 RPS6P62753 249 aaKnown RBP23.95■■□□□ 1.42
UPF3A-201ENST00000351487 RASA3Q14644 834 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 UGCGQ16739 394 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 MAATS1Q7Z4T9 603 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 ARHGEF19Q8IW93 802 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 TEPSINQ96N21 525 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 TAAR1Q96RJ0 339 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 RRP15Q9Y3B9 282 aaKnown RBP23.95■■□□□ 1.42
UPF3A-201ENST00000351487 EMC10Q5UCC4 262 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 DCAF12L1Q5VU92 463 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 CCDC26Q8TAB7 109 aa23.95■■□□□ 1.42
UPF3A-201ENST00000351487 PFASO15067 1338 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 BACH1O14867 736 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 EIF3HO15372 352 aaKnown RBP eCLIP23.94■■□□□ 1.425e-6■■■□□ 14.9
UPF3A-201ENST00000351487 EIF2AK2P19525 551 aaKnown RBP23.94■■□□□ 1.42
UPF3A-201ENST00000351487 SFNP31947 248 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 PSMC5P62195 406 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 POU5F1Q01860 360 aaKnown RBP23.94■■□□□ 1.42
UPF3A-201ENST00000351487 EN1Q05925 392 aaPredicted RBP23.94■■□□□ 1.42
UPF3A-201ENST00000351487 LRIG3Q6UXM1 1119 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 PLEKHO2Q8TD55 490 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 COG5Q9UP83 839 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 GOLGB1Q14789 3259 aaKnown RBP23.94■■□□□ 1.42
UPF3A-201ENST00000351487 GCLMP48507 274 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 SLC20A1Q8WUM9 679 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 LRRC45Q96CN5 670 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 HOMER2Q9NSB8 354 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 ANKEF1Q9NU02 776 aa23.94■■□□□ 1.42
UPF3A-201ENST00000351487 SEPT11Q9NVA2 429 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms