RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 INPP5BP32019 993 aa13.08□□□□□ -0.31
SMAD9-201ENST00000350148 EHHADHQ08426 723 aa13.08□□□□□ -0.31
SMAD9-201ENST00000350148 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.31
SMAD9-201ENST00000350148 CYFIP1Q7L576 1253 aa13.08□□□□□ -0.31
SMAD9-201ENST00000350148 AGO4Q9HCK5 861 aaKnown RBP13.08□□□□□ -0.31
SMAD9-201ENST00000350148 NMT1P30419 496 aaKnown RBP13.08□□□□□ -0.32
SMAD9-201ENST00000350148 BEST2Q8NFU1 509 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 HSPBP1Q9NZL4 362 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 STRIP2Q9ULQ0 834 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 PASKQ96RG2 1323 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 VWA5AO00534 786 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 LRRN2O75325 713 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 OATP04181 439 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 SOX5P35711 763 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
SMAD9-201ENST00000350148 CCDC6Q16204 474 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 CALB1P05937 261 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 DNAJC24Q6P3W2 148 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 SH3RF1Q7Z6J0 888 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 OR6J1Q8NGC5 347 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 MTMR9Q96QG7 549 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 OLFML3Q9NRN5 406 aa13.08□□□□□ -0.32
SMAD9-201ENST00000350148 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
SMAD9-201ENST00000350148 ARMCX2Q7L311 632 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 CICQ96RK0 1608 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-201ENST00000350148 FOXP2O15409 715 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 BFSP1Q12934 665 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 MKRN3Q13064 507 aaKnown RBP13.07□□□□□ -0.32
SMAD9-201ENST00000350148 FOXR2Q6PJQ5 311 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 CCDC121Q6ZUS5 278 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 TMEM51Q9NW97 253 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 GCLMP48507 274 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 GPC5P78333 572 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 KRT81Q14533 505 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
SMAD9-201ENST00000350148 E7EVH7 732 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 MED24O75448 989 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 PRKCBP05771 671 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 CCDC89Q8N998 374 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 RUBCNQ92622 972 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 SLC38A10Q9HBR0 1119 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
SMAD9-201ENST00000350148 ADAMTS1Q9UHI8 967 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 NUB1Q9Y5A7 615 aa13.07□□□□□ -0.32
SMAD9-201ENST00000350148 GRID2IPA4D2P6 1211 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 IL18RAPO95256 599 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 ZSCAN26Q16670 478 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF484Q5JVG2 852 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 TAOK1Q7L7X3 1001 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 TXNDC16Q9P2K2 825 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 SUCLA2Q9P2R7 463 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 GOLGA6CA6NDK9 693 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 GOLGA6DP0CG33 693 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 ACTR2P61160 394 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 PPIL2Q13356 520 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 MESDQ14696 234 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 DRAP1Q14919 205 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 TOGARAM2Q6ZUX3 1019 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 GOLGA6AQ9NYA3 693 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 EMSYQ7Z589 1322 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 NPHP3-ACAD11A0A0J9YXS1 232 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 TNPO2O14787 897 aaKnown RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 GTF2H1P32780 548 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 FMO5P49326 533 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 TAP1Q03518 808 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 LGSNQ5TDP6 509 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 CDKAL1Q5VV42 579 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 CCDC25Q86WR0 208 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 RHPN2Q8IUC4 686 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 C7orf31Q8N865 590 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 P3H4Q92791 437 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 MOCS3O95396 460 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 PTPRAP18433 802 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 CCZ1BP86790 482 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 CCZ1P86791 482 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF699Q32M78 642 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 AFAP1L1Q8TED9 768 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 NSMCE1Q8WV22 266 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 CASZ1Q86V15 1759 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF189O75820 626 aaPredicted RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 RNASE9P60153 205 aaKnown RBP13.06□□□□□ -0.32
SMAD9-201ENST00000350148 CDK17Q00537 523 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 ZNF354CQ86Y25 554 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 PSMB7Q99436 277 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 MED4Q9NPJ6 270 aa13.06□□□□□ -0.32
SMAD9-201ENST00000350148 MKRN1Q9UHC7 482 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms