RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ABHD10Q9NUJ1 306 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 HSPBP1Q9NZL4 362 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 TTC26A0AVF1 554 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 ZNF286BP0CG31 522 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
PTN-201ENST00000348225 TCERG1LQ5VWI1 586 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 ZNF397Q8NF99 534 aaPredicted RBP20.42■□□□□ 0.86
PTN-201ENST00000348225 BICD1Q96G01 975 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 C16orf70Q9BSU1 422 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 TTYH3Q9C0H2 523 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 RNPEPQ9H4A4 650 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 MMRN2Q9H8L6 949 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 SUGCTQ9HAC7 445 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 GNEQ9Y223 722 aaKnown RBP20.42■□□□□ 0.86
PTN-201ENST00000348225 PHLPP2Q6ZVD8 1323 aa20.42■□□□□ 0.86
PTN-201ENST00000348225 H3BRB1 525 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 HNRNPDLO14979 420 aaKnown RBP20.41■□□□□ 0.86
PTN-201ENST00000348225 MAPK13O15264 365 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 MAGEB2O15479 319 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 KRT13P13646 458 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 CTGFP29279 349 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 CNGA1P29973 690 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 KLK7P49862 253 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 CAPSQ13938 189 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 TSR1Q2NL82 804 aaKnown RBP20.41■□□□□ 0.86
PTN-201ENST00000348225 INTS8Q75QN2 995 aaKnown RBP20.41■□□□□ 0.86
PTN-201ENST00000348225 TLK2Q86UE8 772 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 TMEM139Q8IV31 216 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 NEK11Q8NG66 645 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 CBWD1Q9BRT8 395 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 PCIF1Q9H4Z3 704 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 TUT1Q9H6E5 874 aaKnown RBP20.41■□□□□ 0.86
PTN-201ENST00000348225 TMEM134Q9H6X4 195 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 SPTLC3Q9NUV7 552 aa20.41■□□□□ 0.86
PTN-201ENST00000348225 DYNC1LI2O43237 492 aaPredicted RBP20.4■□□□□ 0.86
PTN-201ENST00000348225 ADCY6O43306 1168 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 IGHA2P01877 340 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 EFNA5P52803 228 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 ZBED6P86452 979 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 KIF22Q14807 665 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 PRPF31Q8WWY3 499 aaKnown RBP20.4■□□□□ 0.86
PTN-201ENST00000348225 SLC35C1Q96A29 364 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 Q9Y3F1 56 aa20.4■□□□□ 0.86
PTN-201ENST00000348225 A6NJR5 290 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 TISP43B9A030 160 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 K7ERI5 159 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 ADCY3O60266 1144 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 INSRRP14616 1297 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 GARTP22102 1010 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 FECHP22830 423 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 LIG4P49917 911 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 BFSP1Q12934 665 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 TFDP1Q14186 410 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 HSP90AA2PQ14568 343 aaPredicted RBP20.39■□□□□ 0.86
PTN-201ENST00000348225 ZBTB8OSQ8IWT0 167 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 C17orf53Q8N3J3 647 aaPredicted RBP20.39■□□□□ 0.86
PTN-201ENST00000348225 LRRC71Q8N4P6 559 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 OR8K1Q8NGG5 319 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 EDEM3Q9BZQ6 932 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 AP5M1Q9H0R1 490 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 C2orf40Q9H1Z8 148 aa20.39■□□□□ 0.86
PTN-201ENST00000348225 FAM207AQ9NSI2 230 aaPredicted RBP20.39■□□□□ 0.86
PTN-201ENST00000348225 SUCLA2Q9P2R7 463 aaPredicted RBP20.39■□□□□ 0.86
PTN-201ENST00000348225 ANKRD63C9JTQ0 380 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 ASAP2O43150 1006 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 CCP110O43303 1012 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 C22orf31O95567 290 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 CPT1AP50416 773 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 LAMTOR4Q0VGL1 99 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 DRP2Q13474 957 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 MFSD14CQ5VZR4 134 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 EFCAB12Q6NXP0 572 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 TAS1R3Q7RTX0 852 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 TRAPPC12Q8WVT3 735 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 POMGNT1Q8WZA1 660 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 DNAJC7Q99615 494 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 KCND1Q9NSA2 647 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 GTPBP10A4D1E9 387 aaKnown RBP20.38■□□□□ 0.85
PTN-201ENST00000348225 KIAA0391O15091 583 aaKnown RBP20.38■□□□□ 0.85
PTN-201ENST00000348225 PIGRP01833 764 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 AKR1A1P14550 325 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 IGBP1P78318 339 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 SP3Q02447 781 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 KCNMA1Q12791 1236 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 MKRN4PQ13434 485 aaPredicted RBP20.38■□□□□ 0.85
PTN-201ENST00000348225 CDCA2Q69YH5 1023 aaPredicted RBP20.38■□□□□ 0.85
PTN-201ENST00000348225 TMTC1Q8IUR5 882 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 CCDC155Q8N6L0 562 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 METTL13Q8N6R0 699 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 LSM14BQ9BX40 385 aaKnown RBP20.38■□□□□ 0.85
PTN-201ENST00000348225 CFHR5Q9BXR6 569 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 ARHGAP39Q9C0H5 1083 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 ZNHIT6Q9NWK9 470 aaKnown RBP20.38■□□□□ 0.85
PTN-201ENST00000348225 ZSWIM8A7E2V4 1837 aa20.38■□□□□ 0.85
PTN-201ENST00000348225 CASP8AP2Q9UKL3 1982 aa20.37■□□□□ 0.85
PTN-201ENST00000348225 RNF225M0QZC1 329 aaPredicted RBP20.37■□□□□ 0.85
PTN-201ENST00000348225 TMOD1P28289 359 aa20.37■□□□□ 0.85
PTN-201ENST00000348225 ADSSP30520 456 aa20.37■□□□□ 0.85
PTN-201ENST00000348225 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
PTN-201ENST00000348225 CYP26C1Q6V0L0 522 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms