RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
MBD1-204ENST00000347968 PWWP2AQ96N64 755 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 PYM1Q9BRP8 204 aaKnown RBP17.42■□□□□ 0.38
MBD1-204ENST00000347968 DHX36Q9H2U1 1008 aaKnown RBP17.42■□□□□ 0.38
MBD1-204ENST00000347968 DCLRE1BQ9H816 532 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 HSFX1Q9UBD0 423 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 TRAF5O00463 557 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 KIAA0391O15091 583 aaKnown RBP17.42■□□□□ 0.38
MBD1-204ENST00000347968 PRPF3O43395 683 aaKnown RBP17.42■□□□□ 0.38
MBD1-204ENST00000347968 ZBTB48P10074 688 aaPredicted RBP17.42■□□□□ 0.38
MBD1-204ENST00000347968 SERPINB3P29508 390 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 KCNJ1P48048 391 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 CYTH2Q99418 400 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 CEP72Q9P209 647 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 PPP1R9AQ9ULJ8 1098 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 TDRKHQ9Y2W6 561 aaKnown RBP17.42■□□□□ 0.38
MBD1-204ENST00000347968 DISP2A7MBM2 1401 aa17.42■□□□□ 0.38
MBD1-204ENST00000347968 CBX3Q13185 183 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 PARP6Q2NL67 630 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 WDR72Q3MJ13 1102 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
MBD1-204ENST00000347968 TAF1BQ53T94 588 aaPredicted RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 WDR60Q8WVS4 1066 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 AZIN2Q96A70 460 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 MPP4Q96JB8 637 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 CHORDC1Q9UHD1 332 aaPredicted RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 NUMBLQ9Y6R0 609 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 PALM3A6NDB9 673 aaPredicted RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 E7ENQ6 273 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 GIT2Q14161 759 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 LRRC36Q1X8D7 754 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 MIPOL1Q8TD10 442 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 DDX18Q9NVP1 670 aaKnown RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 GRHL1Q9NZI5 618 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 SEC63Q9UGP8 760 aaKnown RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 IQSEC3Q9UPP2 1182 aaPredicted RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 TNS2Q63HR2 1409 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 ARFGEF2Q9Y6D5 1785 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 TECP42680 631 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 PLOD1Q02809 727 aaPredicted RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 CENPPQ6IPU0 288 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 SEC14L1Q92503 715 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 CLMNQ96JQ2 1002 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 NAP1L3Q99457 506 aaPredicted RBP17.41■□□□□ 0.38
MBD1-204ENST00000347968 ZBTB1Q9Y2K1 713 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 ZNF711Q9Y462 761 aa17.41■□□□□ 0.38
MBD1-204ENST00000347968 AFDNP55196 1824 aaKnown RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 TCRBV5S4A2TA0A5A2 114 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 GALK1P51570 392 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 POLGP54098 1239 aaPredicted RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 APLFQ8IW19 511 aaPredicted RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 AHDC1Q5TGY3 1603 aaPredicted RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 SPATA31A1Q5TZJ5 1347 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 SPDYE16A6NNV3 312 aaPredicted RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 TOM1O60784 492 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 TAC1P20366 129 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 UBE3CQ15386 1083 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 LIN52Q52LA3 116 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 RNF43Q68DV7 783 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 C4orf50Q6ZRC1 276 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 NT5DC3Q86UY8 548 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 MRRFQ96E11 262 aaKnown RBP17.4■□□□□ 0.38
MBD1-204ENST00000347968 KRT82Q9NSB4 513 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 ARHGEF38Q9NXL2 777 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 TMCO1Q9UM00 188 aa17.4■□□□□ 0.38
MBD1-204ENST00000347968 OPHN1O60890 802 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 ALDH1B1P30837 517 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 KCNQ4P56696 695 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 LSAMPQ13449 338 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 TTLL12Q14166 644 aaPredicted RBP17.39■□□□□ 0.38
MBD1-204ENST00000347968 MTFR1Q15390 333 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 LRRC55Q6ZSA7 311 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 SPATA24Q86W54 205 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 NAGPAQ9UK23 515 aa17.39■□□□□ 0.38
MBD1-204ENST00000347968 BOLA2-SMG1P6H3BVE0 249 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 USP1O94782 785 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 SLC9A1P19634 815 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 MARK3P27448 753 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 SEC23AQ15436 765 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 GJB7Q6PEY0 223 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 SCYL3Q8IZE3 742 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 DCTN4Q9UJW0 460 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 ITGA2BP08514 1039 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 RASSF2P50749 326 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
MBD1-204ENST00000347968 FAM98CQ17RN3 349 aaKnown RBP17.39■□□□□ 0.37
MBD1-204ENST00000347968 IQCDQ96DY2 449 aa17.39■□□□□ 0.37
MBD1-204ENST00000347968 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
MBD1-204ENST00000347968 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
MBD1-204ENST00000347968 MYMKA6NI61 221 aa17.38■□□□□ 0.37
MBD1-204ENST00000347968 MAP3K7O43318 606 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms