RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PRPF18Q99633 342 aaKnown RBP20.55■□□□□ 0.88
HDAC4-201ENST00000345617 MBD2Q9UBB5 411 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 TAGAPQ8N103 731 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 PCYOX1LQ8NBM8 494 aa20.55■□□□□ 0.88
HDAC4-201ENST00000345617 TMEM191CA6NGB0 347 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 DNAJC9Q8WXX5 260 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 SUGCTQ9HAC7 445 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 TFAMQ00059 246 aaKnown RBP20.54■□□□□ 0.88
HDAC4-201ENST00000345617 TP53BP2Q13625 1128 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 ENOSF1Q7L5Y1 443 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 EMILIN3Q9NT22 766 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 LMCD1Q9NZU5 365 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 KLHL2O95198 593 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 NUP107P57740 925 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 KRT72Q14CN4 511 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 LRRC8EQ6NSJ5 796 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 DCTN4Q9UJW0 460 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 CSADQ9Y600 493 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 USP14P54578 494 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 CENPPQ6IPU0 288 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 ARHGEF1Q92888 912 aaKnown RBP20.54■□□□□ 0.88
HDAC4-201ENST00000345617 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 BRAFP15056 766 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 MARK3P27448 753 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 TRIM16LQ309B1 348 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 PAGE5Q96GU1 130 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 ZNF594Q96JF6 807 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-201ENST00000345617 LOC102724159A0A0B4J2E5 919 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 PWP2Q15269 919 aaKnown RBP20.54■□□□□ 0.88
HDAC4-201ENST00000345617 PI4K2BQ8TCG2 481 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 PPP1R37O75864 691 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 IFNAR1P17181 557 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 ACBD5Q5T8D3 534 aaPredicted RBP20.54■□□□□ 0.88
HDAC4-201ENST00000345617 ADGRA3Q8IWK6 1321 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 PRPF3O43395 683 aaKnown RBP20.54■□□□□ 0.88
HDAC4-201ENST00000345617 DTNBO60941 627 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 SPAG6O75602 509 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 FAM149B1Q96BN6 582 aa20.54■□□□□ 0.88
HDAC4-201ENST00000345617 SMYD4Q8IYR2 804 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 PTPRTO14522 1441 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 FRMPD2Q68DX3 1309 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 FAM47AQ5JRC9 791 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 G2E3Q7L622 706 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 HDDC2Q7Z4H3 204 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 RNF217Q8TC41 542 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 TCP11X1B4DZS4 312 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 SMAPO00193 183 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 CYP2C19P33261 490 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 CFAP69A5D8W1 941 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 GOLGA8SH3BPF8 625 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 MYO9BQ13459 2157 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 AGBL2Q5U5Z8 902 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 UNC13DQ70J99 1090 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 TRIM54Q9BYV2 358 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 MTO1Q9Y2Z2 717 aaKnown RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 SERPINB3P29508 390 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 RABGAP1LQ5R372 815 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 TAB3Q8N5C8 712 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 FAM167BQ9BTA0 163 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 MDH1P40925 334 aaKnown RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 POLA2Q14181 598 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 TRPM8Q7Z2W7 1104 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 NIM1KQ8IY84 436 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 HIC2Q96JB3 615 aa20.53■□□□□ 0.88
HDAC4-201ENST00000345617 SAMSN1Q9NSI8 373 aaKnown RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 KLHL8Q9P2G9 620 aaPredicted RBP20.53■□□□□ 0.88
HDAC4-201ENST00000345617 CCT8L2Q96SF2 557 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 TRIP13Q15645 432 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-201ENST00000345617 BEGAINQ9BUH8 593 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 NUP85Q9BW27 656 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 ZHX2Q9Y6X8 837 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 A0A1W2PQC6 194 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 ADCK5Q3MIX3 580 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 IP6K2Q9UHH9 426 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 PER1O15534 1290 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-201ENST00000345617 GPS1Q13098 491 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 ERICH1Q86X53 443 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 ZMYND8Q9ULU4 1186 aaPredicted RBP20.52■□□□□ 0.88
HDAC4-201ENST00000345617 HPCAL4Q9UM19 191 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 EIF2S1P05198 315 aaKnown RBP20.52■□□□□ 0.88
HDAC4-201ENST00000345617 JAK3P52333 1124 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 THOC1Q96FV9 657 aaKnown RBP20.52■□□□□ 0.88
HDAC4-201ENST00000345617 MAP3K15Q6ZN16 1313 aa20.52■□□□□ 0.88
HDAC4-201ENST00000345617 NUP153P49790 1475 aaKnown RBP20.52■□□□□ 0.88
HDAC4-201ENST00000345617 ORC4O43929 436 aa20.52■□□□□ 0.87
HDAC4-201ENST00000345617 TAF5LO75529 589 aa20.52■□□□□ 0.87
HDAC4-201ENST00000345617 ACTN3Q08043 901 aaPredicted RBP20.52■□□□□ 0.87
HDAC4-201ENST00000345617 SYCP2LQ5T4T6 812 aa20.52■□□□□ 0.87
HDAC4-201ENST00000345617 PRG3Q9Y2Y8 225 aaPredicted RBP20.52■□□□□ 0.87
HDAC4-201ENST00000345617 E5RI56 91 aa20.52■□□□□ 0.87
HDAC4-201ENST00000345617 FAM47DPA6NHR8 397 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 H0YIN7 160 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 DDHD1Q8NEL9 900 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 ULK4Q96C45 1275 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 RUBCNLQ9H714 662 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 CNGB3Q9NQW8 809 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 SELENONQ9NZV5 590 aa20.51■□□□□ 0.87
HDAC4-201ENST00000345617 CDY2AQ9Y6F7 541 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms