RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ATP2A3Q93084 1043 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 VPS37BQ9H9H4 285 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 SIGLEC1Q9BZZ2 1709 aa17.63■□□□□ 0.41
SMARCA4-201ENST00000344626 DUOXA2Q1HG44 320 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 TMEM35BQ8NCS4 154 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 C2CD2LO14523 706 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 IGFBP4P22692 258 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 CNTN2Q02246 1040 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 SAMD15Q9P1V8 674 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 RPLP2P05387 115 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 TROAPQ12815 778 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 KRT39Q6A163 491 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 SMC6Q96SB8 1091 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 KRT12Q99456 494 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 CYP27A1Q02318 531 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 MRRFQ96E11 262 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 HTATIP2Q9BUP3 242 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 AAASQ9NRG9 546 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 H3BRB1 525 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 CASP1P29466 404 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 GCLMP48507 274 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 ENOSF1Q7L5Y1 443 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 TUT1Q9H6E5 874 aaKnown RBP17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
SMARCA4-201ENST00000344626 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 TAL1P17542 331 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 NFKBIAP25963 317 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 EMC2Q15006 297 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 KRT31Q15323 416 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 SEPT8Q92599 483 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 FAM217BQ9NTX9 383 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 SH3BP5O60239 455 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 CBX1P83916 185 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 MAP7D1Q3KQU3 841 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 TLK2Q86UE8 772 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 KLRG1Q96E93 195 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 CCDC68Q9H2F9 335 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 PLCB1Q9NQ66 1216 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 GAS2O43903 313 aaKnown RBP17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 ZNF746Q6NUN9 644 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 PRRG1O14668 218 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 TOGARAM2Q6ZUX3 1019 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 CDR2LQ86X02 465 aaPredicted RBP17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 TSC1Q92574 1164 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 ANKEF1Q9NU02 776 aa17.61■□□□□ 0.41
SMARCA4-201ENST00000344626 KCNB1Q14721 858 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 FMR1NBQ8N0W7 255 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 LMCD1Q9NZU5 365 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PRCPP42785 496 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PRAMEF19Q5SWL8 479 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 KCTD6Q8NC69 237 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 STRIP2Q9ULQ0 834 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PGK1P00558 417 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 KRT1P04264 644 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PRKAR2AP13861 404 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 CD99L2Q8TCZ2 262 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 SYTL5Q8TDW5 730 aaPredicted RBP17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 TAF6LQ9Y6J9 622 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PDXKO00764 312 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 NKRFO15226 690 aaKnown RBP eCLIP17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 KPNA6O60684 536 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 ACVR2BQ13705 512 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 KIZQ2M2Z5 673 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 BZW1Q7L1Q6 419 aaKnown RBP17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 EFCAB13Q8IY85 973 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PDCD2LQ9BRP1 358 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 CEP72Q9P209 647 aa17.6■□□□□ 0.41
SMARCA4-201ENST00000344626 PASKQ96RG2 1323 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 PLS3P13797 630 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 ATF2P15336 505 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 EHHADHQ08426 723 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 TRIM62Q9BVG3 475 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 A8MXQ7 604 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 MSCO60682 206 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 CLCN3P51790 818 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 PLCB4Q15147 1175 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 CALR3Q96L12 384 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 FBXO2Q9UK22 296 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 ASTN2O75129 1339 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 ZNF286BP0CG31 522 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 BEX3Q00994 111 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 PHLDB2Q86SQ0 1253 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 MCF2LO15068 1137 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 RRP9O43818 475 aaKnown RBP17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 ELNP15502 786 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 RHBDL3P58872 404 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 KCNH2Q12809 1159 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 CPLX4Q7Z7G2 160 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 VSTM4Q8IW00 320 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 CCNYQ8ND76 341 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 MTG1Q9BT17 334 aaPredicted RBP17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 ANAPC5Q9UJX4 755 aa17.59■□□□□ 0.41
SMARCA4-201ENST00000344626 ZNF18P17022 549 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 LY6KQ17RY6 165 aa17.58■□□□□ 0.41
SMARCA4-201ENST00000344626 RNF219Q5W0B1 726 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms