RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CAMTA2O94983 1202 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SRGNP10124 158 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PSMA2P25787 234 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 NAALADL2Q58DX5 795 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 WDR93Q6P2C0 686 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF564Q8TBZ8 553 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 ZIM3Q96PE6 472 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 FBXL5Q9UKA1 691 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SNX12Q9UMY4 172 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 FIS1Q9Y3D6 152 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PHF20L1A8MW92 1017 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 GSTA1P08263 222 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 GSTA2P09210 222 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 ZNF18P17022 549 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 KLRK1P26718 216 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PMS2P54278 862 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 RAD23BP54727 409 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 CUL3Q13618 768 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 LMBRD2Q68DH5 695 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PPP1R18Q6NYC8 613 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 DPP9Q86TI2 863 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SRRM1Q8IYB3 904 aaKnown RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 MCUQ8NE86 351 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SPDYE1Q8NFV5 336 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 C1orf54Q8WWF1 131 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SLC38A10Q9HBR0 1119 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 C1orf167Q5SNV9 1468 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 EMSYQ7Z589 1322 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 CNTNAP5Q8WYK1 1306 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SYNGAP1Q96PV0 1343 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 CASQ2O14958 399 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PRPSAP2O60256 369 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 FAM107AO95990 144 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PDCD7Q8N8D1 485 aaKnown RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 DNAAF3Q8N9W5 541 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 FBXO41Q8TF61 875 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 MAML1Q92585 1016 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 CCSER1Q9C0I3 900 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 TAF1DQ9H5J8 278 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 WDR70Q9NW82 654 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 ETAA1Q9NY74 926 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 GGT7Q9UJ14 662 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 FLT1P17948 1338 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SALL3Q9BXA9 1300 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 DIP2CQ9Y2E4 1556 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PPP1R3GB7ZBB8 358 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 IPO5O00410 1097 aaKnown RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 MAP3K7O43318 606 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 SLC27A3Q5K4L6 730 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 PDZD4Q76G19 769 aaPredicted RBP8.62□□□□□ -1.03
UBE4B-202ENST00000343090 HACE1Q8IYU2 909 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 CDHR1Q96JP9 859 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 IFT122Q9HBG6 1241 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 KCND1Q9NSA2 647 aa8.62□□□□□ -1.03
UBE4B-202ENST00000343090 F5H423 210 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 PODXLO00592 558 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 AP1G2O75843 785 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ASNSP08243 561 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ALCAMQ13740 583 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 SMAD1Q15797 465 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 EHD4Q9H223 541 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 SNX25Q9H3E2 840 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 NGRNQ9NPE2 291 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 MTMR4Q9NYA4 1195 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 RAB21Q9UL25 225 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ATF5Q9Y2D1 282 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 DAGLAQ9Y4D2 1042 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 VIRMAQ69YN4 1812 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 RHOBTB3O94955 611 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 GARSP41250 739 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 PPP6R3Q5H9R7 873 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 SWSAP1Q6NVH7 229 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 CYFIP1Q7L576 1253 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 GBP7Q8N8V2 638 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 GOLPH3Q9H4A6 298 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ATP6V0A4Q9HBG4 840 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 NUB1Q9Y5A7 615 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 MIF4GDA9UHW6 222 aaKnown RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 RASA4BC9J798 803 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 RASA4O43374 803 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 MED7O43513 233 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 HOXA7P31268 230 aaPredicted RBP8.61□□□□□ -1.03
UBE4B-202ENST00000343090 PTPAQ15257 358 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 CENPUQ71F23 418 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ARL8AQ96BM9 186 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 CENPKQ9BS16 269 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 PITPNM3Q9BZ71 974 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 A0A0G2JND7 137 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 PPFIA2O75334 1257 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 SOX5P35711 763 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ST3GAL1Q11201 340 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 GSDMBQ8TAX9 411 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 MYCBPAPQ8TBZ2 947 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 TTC17Q96AE7 1141 aa8.61□□□□□ -1.03
UBE4B-202ENST00000343090 ADAM33Q9BZ11 813 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms