RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 MARCH6O60337 910 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 CLASP2O75122 1294 aaKnown RBP11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 ZC3H11AO75152 810 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 P4HBP07237 508 aaKnown RBP11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 MRE11P49959 708 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 RAB27AP51159 221 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 PPP2R5CQ13362 524 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 NPY5RQ15761 445 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 LONRF3Q496Y0 759 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 NOMO2Q5JPE7 1267 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 PLA2G4FQ68DD2 849 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 ANO5Q75V66 913 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 NEK8Q86SG6 692 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 KSR1Q8IVT5 923 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 VPS52Q8N1B4 723 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 LPPQ93052 612 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 PGBD4Q96DM1 585 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 NECTIN4Q96NY8 510 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 NAP1L4Q99733 375 aaKnown RBP11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 PRRX2Q99811 253 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 INPP5FQ9Y2H2 1132 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 NR2E1Q9Y466 385 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 HCFC2Q9Y5Z7 792 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 ARID2Q68CP9 1835 aa11.3□□□□□ -0.6
SNRPD2-201ENST00000342669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 CCNT1O60563 726 aaKnown RBP11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 ZNF623O75123 536 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 NEFLP07196 543 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 ITIH3Q06033 890 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 GIT2Q14161 759 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 PTPN21Q16825 1174 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 PPP4R3AQ6IN85 833 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 ZBTB33Q86T24 672 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 FBXL6Q8N531 539 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 URGCPQ8TCY9 931 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 CEP170P1Q96L14 293 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 ZBP1Q9H171 429 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 ADAM7Q9H2U9 754 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 NRDE2Q9H7Z3 1164 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 KCNMB3Q9NPA1 279 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 TSHZ2Q9NRE2 1034 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 TBC1D13Q9NVG8 400 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 VAV3Q9UKW4 847 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 PPME1Q9Y570 386 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
SNRPD2-201ENST00000342669 TBX3O15119 743 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 OFD1O75665 1012 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 BAG4O95429 457 aaKnown RBP11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 GALTP07902 379 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 CTSAP10619 480 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 SP100P23497 879 aaPredicted RBP11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 RFC5P40937 340 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 MTHFRP42898 656 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 PTPN5P54829 565 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 NPEPPSP55786 919 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 SCRN1Q12765 414 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 EPHA7Q15375 998 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 PIK3AP1Q6ZUJ8 805 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 OTUD6AQ7L8S5 288 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 SRGAP1Q7Z6B7 1085 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 DDX53Q86TM3 631 aaKnown RBP11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 PRPF31Q8WWY3 499 aaKnown RBP11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 PSPC1Q8WXF1 523 aaKnown RBP11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 IGSF21Q96ID5 467 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 RIPOR3Q96MK2 946 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 FAM193BQ96PV7 902 aaPredicted RBP11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 IFT122Q9HBG6 1241 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 AGPAT5Q9NUQ2 364 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 PCDHB2Q9Y5E7 798 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
SNRPD2-201ENST00000342669 TDRD15B5MCY1 1934 aaKnown RBP11.27□□□□□ -0.6
SNRPD2-201ENST00000342669 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 ASAP2O43150 1006 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 GAS2O43903 313 aaKnown RBP11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 PFKFB2O60825 505 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 YWHABP31946 246 aaKnown RBP11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 IER5LQ5T953 404 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 NCAPH2Q6IBW4 605 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 PPFIBP1Q86W92 1011 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 C4orf19Q8IY42 314 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 SLFN12Q8IYM2 578 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 WASF1Q92558 559 aa11.27□□□□□ -0.61
SNRPD2-201ENST00000342669 TMEM143Q96AN5 459 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms