RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 ZNF713Q8N859 430 aaPredicted RBP13.53□□□□□ -0.24
LMX1A-202ENST00000342310 IQCDQ96DY2 449 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 CEP170P1Q96L14 293 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 FAM213AQ9BRX8 229 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 LRRC4CQ9HCJ2 640 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 ERVK-5Q9HDB9 667 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 INTS9Q9NV88 658 aaKnown RBP13.53□□□□□ -0.24
LMX1A-202ENST00000342310 ASTN1O14525 1302 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
LMX1A-202ENST00000342310 DISP2A7MBM2 1401 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 LRRIQ4A6NIV6 560 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 LMNB1P20700 586 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 MTERF2Q49AM1 385 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 HIBCHQ6NVY1 386 aaPredicted RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 CCDC91Q7Z6B0 441 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 SLC47A2Q86VL8 602 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 ARHGEF19Q8IW93 802 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 LNX1Q8TBB1 728 aaPredicted RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 EPS8L3Q8TE67 593 aaKnown RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 CHURC1Q8WUH1 139 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 RNF25Q96BH1 459 aaPredicted RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 ANAPC7Q9UJX3 599 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 BZW2Q9Y6E2 419 aaKnown RBP13.52□□□□□ -0.24
LMX1A-202ENST00000342310 LRP6O75581 1613 aa13.52□□□□□ -0.24
LMX1A-202ENST00000342310 WDR91A4D1P6 747 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 TGFB1I1O43294 461 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 PEX10O60683 326 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 MMEP08473 750 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 AARSP49588 968 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMX1A-202ENST00000342310 ACOT2P49753 483 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 PRELPP51888 382 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 CCDC137Q6PK04 289 aaKnown RBP13.52□□□□□ -0.25
LMX1A-202ENST00000342310 PBKQ96KB5 322 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 GLT8D2Q9H1C3 349 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
LMX1A-202ENST00000342310 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 NUP188Q5SRE5 1749 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 TCRBV7S2A1N4TA0A589 114 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 VAMP7P51809 220 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 IFI35P80217 286 aaPredicted RBP13.52□□□□□ -0.25
LMX1A-202ENST00000342310 ZCWPW2Q504Y3 356 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 GKAP1Q5VSY0 366 aaPredicted RBP13.52□□□□□ -0.25
LMX1A-202ENST00000342310 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 PHLDB3Q6NSJ2 640 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 SCARA5Q6ZMJ2 495 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 HAUS6Q7Z4H7 955 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 PODNQ7Z5L7 613 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 IL31RAQ8NI17 732 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 ALG3Q92685 438 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 C9orf72Q96LT7 481 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 FAM20AQ96MK3 541 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 NUP85Q9BW27 656 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 TRIM7Q9C029 511 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 EHMT1Q9H9B1 1298 aa13.52□□□□□ -0.25
LMX1A-202ENST00000342310 F8VZ95 297 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 YY1P25490 414 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 HOXD13P35453 343 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 CDK17Q00537 523 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SEPT7Q16181 437 aaKnown RBP13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 MYCBPAPQ8TBZ2 947 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 MASTLQ96GX5 879 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 MYCBPQ99417 103 aaPredicted RBP13.51□□□□□ -0.25
LMX1A-202ENST00000342310 C11orf70Q9BRQ4 267 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SLC24A3Q9HC58 644 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 KCNH7Q9NS40 1196 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 APEX2Q9UBZ4 518 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SEPT9Q9UHD8 586 aaPredicted RBP13.51□□□□□ -0.25
LMX1A-202ENST00000342310 PEX19P40855 299 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 EPHA7Q15375 998 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 EDRF1Q3B7T1 1238 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 KIAA1755Q5JYT7 1200 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 DCAF4Q8WV16 495 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 KAT2BQ92831 832 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 KCNMB3Q9NPA1 279 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 HAUS2Q9NVX0 235 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 MRPL11Q9Y3B7 192 aaKnown RBP13.51□□□□□ -0.25
LMX1A-202ENST00000342310 DENND3A2RUS2 1198 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 BFSP1Q12934 665 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 MTMR1Q13613 665 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
LMX1A-202ENST00000342310 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
LMX1A-202ENST00000342310 GMNCA6NCL1 334 aa13.5□□□□□ -0.25
LMX1A-202ENST00000342310 MAPK4P31152 587 aa13.5□□□□□ -0.25
LMX1A-202ENST00000342310 PPP3CAQ08209 521 aa13.5□□□□□ -0.25
LMX1A-202ENST00000342310 ZNF844Q08AG5 666 aa13.5□□□□□ -0.25
LMX1A-202ENST00000342310 PTGISQ16647 500 aa13.5□□□□□ -0.25
LMX1A-202ENST00000342310 ZNF365Q70YC5 407 aa13.5□□□□□ -0.25
LMX1A-202ENST00000342310 ZBTB33Q86T24 672 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms