RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CDC25AP30304 524 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 HOXA11P31270 313 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 MRPS5P82675 430 aaKnown RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 LONRF3Q496Y0 759 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 TIGD5Q53EQ6 642 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 NAALADL2Q58DX5 795 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 KRT79Q5XKE5 535 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 PADI6Q6TGC4 694 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 LRRC55Q6ZSA7 311 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 HELQQ8TDG4 1101 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 HLA-CQ95604 372 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 ASB2Q96Q27 587 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 COL25A1Q9BXS0 654 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 LMAN2LQ9H0V9 348 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 CWH43Q9H720 699 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 AAASQ9NRG9 546 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 FAM105AQ9NUU6 356 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
ERCC1-203ENST00000340192 COG5Q9UP83 839 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 PCDHB12Q9Y5F1 795 aa16.22■□□□□ 0.19
ERCC1-203ENST00000340192 INO80B-WBP1J3KQ70 363 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 ERLIN2O94905 339 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 CSPG5O95196 566 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 SKIP12755 728 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 RAB27AP51159 221 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 MBTD1Q05BQ5 628 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 PCBP1Q15365 356 aaKnown RBP eCLIP16.21■□□□□ 0.19
ERCC1-203ENST00000340192 TJAP1Q5JTD0 557 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 IFNLR1Q8IU57 520 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-203ENST00000340192 LRRC43Q8N309 656 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 COLGALT1Q8NBJ5 622 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 LPPQ93052 612 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 MMTAG2Q9BU76 263 aaKnown RBP16.21■□□□□ 0.19
ERCC1-203ENST00000340192 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 BHMT2Q9H2M3 363 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 NSUN3Q9H649 340 aaKnown RBP16.21■□□□□ 0.19
ERCC1-203ENST00000340192 PCDHB2Q9Y5E7 798 aa16.21■□□□□ 0.19
ERCC1-203ENST00000340192 VWA3AA6NCI4 1184 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 LRRIQ4A6NIV6 560 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 TSPAN1O60635 241 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 ZNF623O75123 536 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 LAG3P18627 525 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 CYP11B2P19099 503 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 DNAJB1P25685 340 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 CAMK1Q14012 370 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 TCEAL5Q5H9L2 206 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 UBXN11Q5T124 520 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 ARL6IP4Q66PJ3 421 aaKnown RBP16.2■□□□□ 0.18
ERCC1-203ENST00000340192 SPPL3Q8TCT6 385 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 MUC3AQ02505 3323 aa16.2■□□□□ 0.18
ERCC1-203ENST00000340192 MEIS3P2A8K0S8 358 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 E9PMD0 336 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 FGF18O76093 207 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 SYT1P21579 422 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 AXLP30530 894 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 AMHR2Q16671 573 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 CSPP1Q1MSJ5 1256 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 AAK1Q2M2I8 961 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 NOTUMQ6P988 496 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 POF1BQ8WVV4 589 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 BSNDQ8WZ55 320 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 CPB2Q96IY4 423 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 DNM3Q9UQ16 869 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 MYO7AQ13402 2215 aa16.19■□□□□ 0.18
ERCC1-203ENST00000340192 TCF20Q9UGU0 1960 aaKnown RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 EYA4O95677 639 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 PBX3P40426 434 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 KCNQ1P51787 676 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 ZRSR1Q15695 479 aaKnown RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 CDCA2Q69YH5 1023 aaPredicted RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 KCNT2Q6UVM3 1135 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 MRPL10Q7Z7H8 261 aaKnown RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 SYMPKQ92797 1274 aaKnown RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 SNX21Q969T3 373 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 PGBD4Q96DM1 585 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 MRPL9Q9BYD2 267 aaKnown RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
ERCC1-203ENST00000340192 POLD4Q9HCU8 107 aa16.18■□□□□ 0.18
ERCC1-203ENST00000340192 BRWD1Q9NSI6 2320 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-203ENST00000340192 B4GALT5O43286 388 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 OFD1O75665 1012 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 ARF4P18085 180 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-203ENST00000340192 NOMO2Q5JPE7 1267 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 HYIQ5T013 277 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 AGMOQ6ZNB7 445 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 KCNK18Q7Z418 384 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 SMG8Q8ND04 991 aaKnown RBP16.17■□□□□ 0.18
ERCC1-203ENST00000340192 RSPH1Q8WYR4 309 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 CCDC51Q96ER9 411 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 ZNF558Q96NG5 402 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 EIF2AQ9BY44 585 aaKnown RBP16.17■□□□□ 0.18
ERCC1-203ENST00000340192 CSRNP2Q9H175 543 aa16.17■□□□□ 0.18
ERCC1-203ENST00000340192 INPP5FQ9Y2H2 1132 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms