RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GPATCH4Q5T3I0 446 aaKnown RBP15.22■□□□□ 0.03
PCDH8-201ENST00000338862 LRIG3Q6UXM1 1119 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 ACTRT1Q8TDG2 376 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 MTFR1LQ9H019 292 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 DDX4Q9NQI0 724 aaKnown RBP15.22■□□□□ 0.03
PCDH8-201ENST00000338862 PCDHAC2Q9Y5I4 1007 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 PASKQ96RG2 1323 aa15.22■□□□□ 0.03
PCDH8-201ENST00000338862 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
PCDH8-201ENST00000338862 GCFC2P16383 781 aaKnown RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 BYSLQ13895 437 aaKnown RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 FAM182AQ5T1J6 154 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 C10orf76Q5T2E6 689 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 C6orf118Q5T5N4 469 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 RBM26Q5T8P6 1007 aaKnown RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 SLC35C1Q96A29 364 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 AKAP11Q9UKA4 1901 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 TCRBV7S2A1N4TA0A589 114 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 ANP32DO95626 131 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 RPL21P46778 160 aaKnown RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 FNTAP49354 379 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 ZFPM1Q8IX07 1006 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 LNX1Q8TBB1 728 aaPredicted RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 NUP85Q9BW27 656 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 YY1AP1Q9H869 796 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 EIF3BP55884 814 aaKnown RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 RNF207Q6ZRF8 634 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 SCFD2Q8WU76 684 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 CCDC77Q9BR77 488 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.03
PCDH8-201ENST00000338862 NARFQ9UHQ1 456 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 PNMA3Q9UL41 463 aa15.21■□□□□ 0.03
PCDH8-201ENST00000338862 FAM102BQ5T8I3 360 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 PPP1R18Q6NYC8 613 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 IFT74Q96LB3 600 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
PCDH8-201ENST00000338862 DCTN4Q9UJW0 460 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 ANAPC7Q9UJX3 599 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.2■□□□□ 0.02
PCDH8-201ENST00000338862 F5H6K3 240 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 EML1O00423 815 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 KLRC3Q07444 240 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 TAF11Q15544 211 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 TMEM119Q4V9L6 283 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 TATDN2Q93075 761 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 TRIM6Q9C030 488 aaPredicted RBP15.2■□□□□ 0.02
PCDH8-201ENST00000338862 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 SUCLA2Q9P2R7 463 aaPredicted RBP15.2■□□□□ 0.02
PCDH8-201ENST00000338862 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 FAM86B1E9PN63 330 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 GH2P01242 217 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 FAM86B2P0C5J1 330 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 PDE6CP51160 858 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 SYN2Q92777 582 aaPredicted RBP15.2■□□□□ 0.02
PCDH8-201ENST00000338862 RNF25Q96BH1 459 aaPredicted RBP15.2■□□□□ 0.02
PCDH8-201ENST00000338862 PITPNM3Q9BZ71 974 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 ANAPC5Q9UJX4 755 aa15.2■□□□□ 0.02
PCDH8-201ENST00000338862 PI4K2BG5E9Z4 385 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 GOLGA8RI6L899 631 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 HIP1RO75146 1068 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ATF2P15336 505 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 MAPK4P31152 587 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 DYNLT1P63172 113 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 KRT17Q04695 432 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 AGBL2Q5U5Z8 902 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 C4orf33Q8N1A6 199 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 PI4K2AQ9BTU6 479 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 KCTD10Q9H3F6 313 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 CLRN2A0PK11 232 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 PDXKO00764 312 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 LCA5LO95447 670 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ATP6V1G2O95670 118 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 DRD4P21917 467 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 MAPK7Q13164 816 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 TMEM132AQ24JP5 1023 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 SWT1Q5T5J6 900 aaKnown RBP15.19■□□□□ 0.02
PCDH8-201ENST00000338862 NAIF1Q69YI7 327 aaPredicted RBP15.19■□□□□ 0.02
PCDH8-201ENST00000338862 PPP4R3CPQ6ZMV5 832 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 RUBCNQ92622 972 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 AGPAT1Q99943 283 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ZNF577Q9BSK1 485 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 FAM129AQ9BZQ8 928 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 TRIM7Q9C029 511 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 USP20Q9Y2K6 914 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 TCP10L2B9ZVM9 353 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 SGPL1O95470 568 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 PYGMP11217 842 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ELF3P78545 371 aaPredicted RBP15.19■□□□□ 0.02
PCDH8-201ENST00000338862 RNASELQ05823 741 aaKnown RBP15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ADCY2Q08462 1091 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ZNF564Q8TBZ8 553 aaPredicted RBP15.19■□□□□ 0.02
PCDH8-201ENST00000338862 KLF6Q99612 283 aaPredicted RBP15.19■□□□□ 0.02
PCDH8-201ENST00000338862 ZNF148Q9UQR1 794 aa15.19■□□□□ 0.02
PCDH8-201ENST00000338862 MARF1Q9Y4F3 1742 aaKnown RBP15.18■□□□□ 0.02
PCDH8-201ENST00000338862 RASA4BC9J798 803 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 RASA4O43374 803 aa15.18■□□□□ 0.02
PCDH8-201ENST00000338862 GPC5P78333 572 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms